Tc05v2_t019510.1

Overview
NameTc05v2_t019510.1
Unique NameTc05v2_t019510.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length483
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 17 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
Productoxygen-evolving enhancer protein 2, chloroplastic
NoteProtease inhibitor HPI
Cross References
External references for this mRNA
DatabaseAccession
GeneID18599708
GenbankXM_018121805.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc05v2_g019510Tc05v2_g019510Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc05v2_p019510.1Tc05v2_p019510.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto292471auto292471Theobroma cacaoexon
exon-auto292472auto292472Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto292473auto292473Theobroma cacaoCDS
CDS-auto292474auto292474Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc05v2_t019510.1 ID=Tc05v2_t019510.1|Name=Tc05v2_t019510.1|organism=Theobroma cacao|type=mRNA|length=483bp
ATGGCGTCTACTGCATGTTTCTTTCATCACCAAGCTTTCGTCCACGCACC
ATTAATTCCAAGATCTTCATCCCCACAGCGCCACCGCCTCAACATCAAGC
CCTCCAAGCTTGTGTGTAGGGCTCCGAATCAGCCGCTGAATAAAGATCAT
CAAGCCGTCCAAGGAGGCGTTTCTCGGAGGTCGGTTGTCGATGCGCTTAT
TGTTGGTTCTGCAGCGATTGGCTCTGCGCTTACATTTGTTGGTGCAGGCT
ATGCTGCTGGTTTTTCATTCGGACCGTTTAAGCCACCAGGTAAAGAGTCG
TGGCCGGAGCTGGTTGGGGAGAAAGGAGAGGTTGCAGCAGCGAAGATCGA
GAAAGAGAATCCAAATGTGAAAGCAGTGCTGTTGTTTGAGGGAGATATAG
CCGATATGAGGTTCGATTTTGGTAGGGTTCGGGTTGTTGTCGATGCAGAC
GGGATAGTGACTCAAGTGCCTCGGATTGGCTAG
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protein sequence of Tc05v2_p019510.1

>Tc05v2_p019510.1 ID=Tc05v2_p019510.1|Name=Tc05v2_p019510.1|organism=Theobroma cacao|type=polypeptide|length=161bp
MASTACFFHHQAFVHAPLIPRSSSPQRHRLNIKPSKLVCRAPNQPLNKDH
QAVQGGVSRRSVVDALIVGSAAIGSALTFVGAGYAAGFSFGPFKPPGKES
WPELVGEKGEVAAAKIEKENPNVKAVLLFEGDIADMRFDFGRVRVVVDAD
GIVTQVPRIG*
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