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Properties
Property Name | Value |
Model evidence | Supporting evidence includes similarity to: 30 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns |
Product | disease resistance protein RPM1, transcript variant X5 |
Note | Putative Disease resistance protein RPM1 |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
CDS-auto292298 | auto292298 | Theobroma cacao | CDS |
Sequences
The following sequences are available for this feature:
mRNA sequence >Tc05v2_t019360.1 ID=Tc05v2_t019360.1|Name=Tc05v2_t019360.1|organism=Theobroma cacao|type=mRNA|length=2805bp ATGGCTTTAAGCGCAACAGATCTCTTATTGGGTAGGATACTTTCCATCAT GGAAAACGAAGCATCATTGCTGAGTGGGGTTCATGATGAAATCAATGAAC TCAAGCTTGAGCTGACTAGCATGAGATCCTTTCTTGAGGATGCTGATAGA ACTAGAGTAGTGCAGAGCAAGGCAGAGAATGATTGGGTGGTAGGTGTGCG AGAAATTGCTCATCAAGTAGAAGATATCATTGACAAGTACATGTATGACA TGAACAGGCAACAACAATGGAGGTGGGGGTATACATTCACAAGTTTTTTC CTAAAGGGTATTCAGGTTCCGCAGAATCTATGGATGAAGGATAGATTTGC TAAAAAGTTACAAGATATCAATAAGGAGATTAAAAGCATTCCAGAGAGAA GCCAGCGATACGGGGTTTATCAATTAGAAGTGAAGGATAAAAATTTACAA GGAATGCTTGGCAATTGTGATCTTAATTGGCTGAAAAATGAGAGTGAATC TTCTCTTTTTCTTAAAGATGATGATCTTGTGGGCATCAAAAAGACTCAAC GCGAGTTATTGGGTTGGTTGACGAATGGAGACCTTGAAAGAACTGTGATT TCTGTGACAGGGATGGGTGGTTTAGGCAAAACTACTCTTGTTGCTAACAC CTTCAATAAACAAGTTGTCAATCAGCATTTTGACTTTTGTGCCTGGATCA CTGTCTCACAACAATATGCAATTGAAGAATTGCTTAGATCCATGATCAAA GAAATTTACATGAAGGCAAATGAACAAACTCCTGTGAACCTGAACGCCCT GAGTTACAGGGATTTGGGGGAGAAACTTGAGAAGTACTTGCAGGCAAAGA GGTATCTTATTGTGTTAGATGATGTTTGGAGCCTCAACCTCTGGCAACAG ATAAGCAGAGTCCTTCCTAATGGAAGGAATGGAAGTCGGATCATGCTTAC TACACGAATGAAAGAGGTTGCTTTTTTCCAATTTGGGATTGTAAACCACG TCCTTGAACTTAAGCCCTTAAGAGACAAGGAGGCTTGGACGCTTTTCTGC ATGAAAGCTTTCCCAAGCAATCTTGGTCAATGTCCACCATATCTTGATTC TTTAGCGAGGAACCTAGCTGAAAAATGTAAAGGCTTGCCGTTAGCTATTG TGGCTTTGGGAGGTTTGTTGTCTTCCAAGAAGTTCCTAGCAGAATGGAGA AATGTCCATGACAACTTAAATTGGGAGCTAAGCAACAACCCTGAGCTGGA AGCAGTGAAGTGTATCTTACTGCTTAGTTACTATCATCTGCCTTACCGAC TTAAGCATTGTTTTTTATACTGTTGCATATTCCCAGAAGATTATCTGATT AGGCGAAACAGGCTCATTAGACTCTGGATGGCAGAAGGCTTTGTGGAGCC AGTTACAGGAGCAACACCAGAAGTAGTAGCTGAGAGATACCTGACGGAAT TGATTTCTCGAGGCTTGCTTCAAGTTACAAAGAGGAATGAATCTGGAAGG CCGCAAACATGTAAGATGCACGACATTCTGCGAGAGCTTGCGGTTTCCAT ATCAGAAACAGAAAAGTTTGTCGCCATATCTGATAGGAAAGAAGCAGTTG TAGTAGGAGACAATGGAATTCACCGTTTGTCAATTGAGGTAAGGGATAAA GAGATGAAAGCAGGAAAGGGTATATCAAAACTTCGTTCATTGTTTGTTTT TGCTGTTGATGAAATCTCTAAGTCTTCCTGTAATAGCTTGCCATCTGGTT TTAAATTGTTGAGAGTGTTGGATTTACAAGATGCCCCAATCAACCAACTC CCAGGTGAAGTGGTAAATTTATTCAATTTGAGATATCTGAACTTAACAGG GACTCAAGTGAAGGAGCTTCCAAAATCGATCGGAAAGCTTTGTAACTTAC AGTCCTTGTTCCTCAAGGAAACCCAAATTGAAGAGCTTCCGCCAGGAATC GTGAAGTTGAAAAACCTGCGGCATCTAATTGTTTACCGTTTCAATATTAG AGGGACGGACTATGACCGTTGGGTCGGCATGCGTTTACCATCCAACATCT TCTTGGTAAAGAGCTTACAAGTGTTGACTTTTGCGGAAGCAGGGGACACC TTCATAAAAAATCTCAGCAAAATGACGCAGCTAAAAAGGCTTTGCTTTGC GAATGTCAAGGAAGCTAATGAAAAAGACCTGTGCTTCTCCATTGGAAAAA TAAGCCTCCTTCGCTACTTAATGGTGATGTCGTGTAATAAGGAGGAGCGA TTGAAGATGGATCAACTTGTCGAAGCTCCTCCTTGCCTTGAGAAACTTGT TCTGGCTGGGAAATTGGAGAAGCTGCCGCACTGGTTTAAGTCCCTCCAAA ACCTCACATGTCTGAGACTACATTGGTCTAGATTGAGGGAAGAAGGTTTT CTCACTCACATCCAAGCATTGCCTAACCTGGGACGAATTACACTCGTGAA TGCGTTCGAGGGAGAGCGGTTATGCTTTCTTCAAGGGTTCCAAAAGCTTA AGGTTTTAAGAATACAGAAATTCCCTGGGCTGAAAGACATTGTGATAAAT AAAGGAGTCATGCCTGGTCTTCAGGAGCTAAACATACGAGAATGCCCAAA GTTTGTGAAATTACCACATGCTTGGGGAAGTGATCTACCTGATCTCAGAA AAGTTTGTTTGAGGGATGTTTCGAGTGAGATTATTGAGCAAATCTGTGGA GCGCAGAGTATGGCTCAGCCAGCAATCAGAGTCATCTTATTAAGCAGAGT GGAAGATAATGATGATGAATCTAATTTCAAGTGGGTGTATAGAACCTATG ACTGA back to topprotein sequence of Tc05v2_p019360.1 >Tc05v2_p019360.1 ID=Tc05v2_p019360.1|Name=Tc05v2_p019360.1|organism=Theobroma cacao|type=polypeptide|length=935bp
MALSATDLLLGRILSIMENEASLLSGVHDEINELKLELTSMRSFLEDADR TRVVQSKAENDWVVGVREIAHQVEDIIDKYMYDMNRQQQWRWGYTFTSFF LKGIQVPQNLWMKDRFAKKLQDINKEIKSIPERSQRYGVYQLEVKDKNLQ GMLGNCDLNWLKNESESSLFLKDDDLVGIKKTQRELLGWLTNGDLERTVI SVTGMGGLGKTTLVANTFNKQVVNQHFDFCAWITVSQQYAIEELLRSMIK EIYMKANEQTPVNLNALSYRDLGEKLEKYLQAKRYLIVLDDVWSLNLWQQ ISRVLPNGRNGSRIMLTTRMKEVAFFQFGIVNHVLELKPLRDKEAWTLFC MKAFPSNLGQCPPYLDSLARNLAEKCKGLPLAIVALGGLLSSKKFLAEWR NVHDNLNWELSNNPELEAVKCILLLSYYHLPYRLKHCFLYCCIFPEDYLI RRNRLIRLWMAEGFVEPVTGATPEVVAERYLTELISRGLLQVTKRNESGR PQTCKMHDILRELAVSISETEKFVAISDRKEAVVVGDNGIHRLSIEVRDK EMKAGKGISKLRSLFVFAVDEISKSSCNSLPSGFKLLRVLDLQDAPINQL PGEVVNLFNLRYLNLTGTQVKELPKSIGKLCNLQSLFLKETQIEELPPGI VKLKNLRHLIVYRFNIRGTDYDRWVGMRLPSNIFLVKSLQVLTFAEAGDT FIKNLSKMTQLKRLCFANVKEANEKDLCFSIGKISLLRYLMVMSCNKEER LKMDQLVEAPPCLEKLVLAGKLEKLPHWFKSLQNLTCLRLHWSRLREEGF LTHIQALPNLGRITLVNAFEGERLCFLQGFQKLKVLRIQKFPGLKDIVIN KGVMPGLQELNIRECPKFVKLPHAWGSDLPDLRKVCLRDVSSEIIEQICG AQSMAQPAIRVILLSRVEDNDDESNFKWVYRTYD* back to top
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