Tc05v2_t018930.1

Overview
NameTc05v2_t018930.1
Unique NameTc05v2_t018930.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length384
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
Productuncharacterized LOC18599640
NotePolymerase delta 4
Cross References
External references for this mRNA
DatabaseAccession
GeneID18599640
GenbankXM_018121171.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc05v2_g018930Tc05v2_g018930Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc05v2_p018930.1Tc05v2_p018930.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto291467auto291467Theobroma cacaoexon
exon-auto291468auto291468Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto291469auto291469Theobroma cacaoCDS
CDS-auto291470auto291470Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc05v2_t018930.1 ID=Tc05v2_t018930.1|Name=Tc05v2_t018930.1|organism=Theobroma cacao|type=mRNA|length=384bp
ATGGCAACCACTTCCAAGAACATGAAGGGTTTCTACAGGCAAAAGAAGAA
CAACAGTAGGGGAGGCATAACCAAGTCGAAATCCTCGAAATCAACCAAAA
ACCCGTCGCCCAGTCACGCCGCTACTTTCGGTTCCGATATCACCCAGCCC
GCCGCCCTTACTTCTCCCGGCGGTTCCCTCGATCTCAAAGATGATTTTGA
TGTGCAAGAGGAAGTGTCAAGGCATTTTGATATGAACATGGCATATGGAC
CGTGCCTTGGGATAACGCGGATGGCTCGTTGGGAAAGAGCTCAAAGGTTG
GGGCTAAACCCTCCTAAAGAAATTGAGAATCTCTTGAAAGGTGGGAAAGT
GAAGTTAGAATCCTTATTTGATGGTCGTGTTTAG
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protein sequence of Tc05v2_p018930.1

>Tc05v2_p018930.1 ID=Tc05v2_p018930.1|Name=Tc05v2_p018930.1|organism=Theobroma cacao|type=polypeptide|length=128bp
MATTSKNMKGFYRQKKNNSRGGITKSKSSKSTKNPSPSHAATFGSDITQP
AALTSPGGSLDLKDDFDVQEEVSRHFDMNMAYGPCLGITRMARWERAQRL
GLNPPKEIENLLKGGKVKLESLFDGRV*
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