Tc05v2_t018190.1

Overview
NameTc05v2_t018190.1
Unique NameTc05v2_t018190.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1128
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 10 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
Productalcohol dehydrogenase-like 5
NotePutative Alcohol dehydrogenase-like 5
Cross References
External references for this mRNA
DatabaseAccession
GeneID18599592
GenbankXM_007029624.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc05v2_g018190Tc05v2_g018190Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc05v2_p018190.1Tc05v2_p018190.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto290250auto290250Theobroma cacaoexon
exon-auto290251auto290251Theobroma cacaoexon
exon-auto290252auto290252Theobroma cacaoexon
exon-auto290253auto290253Theobroma cacaoexon
exon-auto290254auto290254Theobroma cacaoexon
exon-auto290255auto290255Theobroma cacaoexon
exon-auto290256auto290256Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto290257auto290257Theobroma cacaoCDS
CDS-auto290258auto290258Theobroma cacaoCDS
CDS-auto290259auto290259Theobroma cacaoCDS
CDS-auto290260auto290260Theobroma cacaoCDS
CDS-auto290261auto290261Theobroma cacaoCDS
CDS-auto290262auto290262Theobroma cacaoCDS
CDS-auto290263auto290263Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc05v2_t018190.1 ID=Tc05v2_t018190.1|Name=Tc05v2_t018190.1|organism=Theobroma cacao|type=mRNA|length=1128bp
ATGCCCAACGCCAACTCCCAAGTCCTAACCTGCAAAGCCATAGTAAGTTG
GGGAAAGGATGAGCCGTTGAAGGTGGAAGAGATACAAGTTGAACCACCAA
AATCATCCGAAGTTCGGGTTAAAATGCTATATGCCAGTGTTTGTCACACT
GATATATTGTTCGCCAATGGATTCCCAATTCCTTCTTTTCCTCGTGTTAT
GGGGCATGAAGGCGTCGGGGTGATTGAGAGCTTTGGAAATGACGTGCGTG
GACTAAATGAAGGAGACATCGTGATACCAGCCTATGTTGCAGAGTGTAAA
ACATGTGAGAACTGTATGTCTGAAAAGACAAATTTATGCTTAAAATACCC
TTTAAGTTACAATGGCTTAATGCTGGACGGTACTTCGAGATTGTCCATTG
GAGGCCAAACTGCCTACCATGCATTTTCATGCTCCACATGGTCTGAATAC
ATGGTTATCAATGCCAACTTTGTCCTCAAGATTGACCCCAGCATACCACT
ATCGGATGCTAGCTTCCTTTCATGTGGATTTTCAACCGGATATGGGGCAG
CTTGGAAGGATGCTAAGGTTGAAAAGGGCTCAACTGTGGCTGTTTTTGGT
CTTGGAGCGGTTGGATTAGGCGCGATCAAGGGAGCCAAAAGCCAAGGTGC
CACTAAAGTAATTGGCATAGACAAGAACCCAAGAAAAGAAGCAAAGGGAC
GAGCTTTTGGAATGACAGATTTCATAAACCCCGATGACTCTGATAGATGT
ATTGCCGAATTGGTCAAAGATTTAACTGGTGGAATGGGTGTGGACTACAG
CTTTGAATGCACTGGGGTTCCACCCCTCATCAATGAAGCCATTGAAGCCA
CAAAACTGGGAGCAGGAAAGATCATACAGATTGGAGCAGGAGAACATTCA
AGTGTAAACATAAATTTTATAGGCATTCTCCTTGGCAGAACTTTGAAGGG
GTCGATTTTTGGAGGGCTCAAAGGCAAATCTGACCTTCCGATTATCTATG
AAAAATGTAAAAATAGGGAAATACAGCTTGACGAACTATTGACTCATGAA
ATTCAGCTGCAAGAAGCAAACAACGTATTTGAGTTGTTGAAGCAACCAGA
TTGTGTCAAGGTTTTGATCAAGATTTGA
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protein sequence of Tc05v2_p018190.1

>Tc05v2_p018190.1 ID=Tc05v2_p018190.1|Name=Tc05v2_p018190.1|organism=Theobroma cacao|type=polypeptide|length=376bp
MPNANSQVLTCKAIVSWGKDEPLKVEEIQVEPPKSSEVRVKMLYASVCHT
DILFANGFPIPSFPRVMGHEGVGVIESFGNDVRGLNEGDIVIPAYVAECK
TCENCMSEKTNLCLKYPLSYNGLMLDGTSRLSIGGQTAYHAFSCSTWSEY
MVINANFVLKIDPSIPLSDASFLSCGFSTGYGAAWKDAKVEKGSTVAVFG
LGAVGLGAIKGAKSQGATKVIGIDKNPRKEAKGRAFGMTDFINPDDSDRC
IAELVKDLTGGMGVDYSFECTGVPPLINEAIEATKLGAGKIIQIGAGEHS
SVNINFIGILLGRTLKGSIFGGLKGKSDLPIIYEKCKNREIQLDELLTHE
IQLQEANNVFELLKQPDCVKVLIKI*
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