Tc05v2_t018180.1

Overview
NameTc05v2_t018180.1
Unique NameTc05v2_t018180.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1281
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 1 EST, 1 Protein, and 98% coverage of the annotated genomic feature by RNAseq alignments
Productalcohol dehydrogenase-like 2
NotePutative Alcohol dehydrogenase-like 2
Cross References
External references for this mRNA
DatabaseAccession
GeneID18599593
GenbankXM_018122429.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc05v2_g018180Tc05v2_g018180Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc05v2_p018180.1Tc05v2_p018180.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto290235auto290235Theobroma cacaoexon
exon-auto290236auto290236Theobroma cacaoexon
exon-auto290237auto290237Theobroma cacaoexon
exon-auto290238auto290238Theobroma cacaoexon
exon-auto290239auto290239Theobroma cacaoexon
exon-auto290240auto290240Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto290241auto290241Theobroma cacaoCDS
CDS-auto290242auto290242Theobroma cacaoCDS
CDS-auto290243auto290243Theobroma cacaoCDS
CDS-auto290244auto290244Theobroma cacaoCDS
CDS-auto290245auto290245Theobroma cacaoCDS
CDS-auto290246auto290246Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc05v2_t018180.1 ID=Tc05v2_t018180.1|Name=Tc05v2_t018180.1|organism=Theobroma cacao|type=mRNA|length=1281bp
ATGTCAAACAGCAGTTCACAACTCATAACATGCAAAGTTAGCTTAGAATT
TAGCAAAGTTGTTTTGATTAAAACTGTTTTAAGTTATTGTTTTTCATTAA
ATTCAGAAGGTTGGGATTACTCTTATTTTCTTTTATTTTTTGCAACTCTG
ATATCTCTCATGCTTGTCCTTTGGAGTAACATGGCAGCAATAGTATGTTG
GGGAAAAGGGGAGCCATTAAAGGTTGAAGAGATACAAGTAGAGCCACCAA
AATCATCTGAAGTTCGAGTTAAAATGCTATGTGCCAGTGTTTGTCACAGT
GACATATTGTCAACCAGAGGATTCCCAAGTCCTCTTTTCCCTCGAGTCAT
GGGGCATGAAGGTGTTGGGGTGGTGGAGAGCATCTGTGAGGAAGTCAATG
GGCTAAAACAGGGAGATGTTGTGATTCCGACCTATGTCGCAGAGTGTCAA
ACATGTGAGAATTGCACATCCGAGAACACTAATTTATGCCTAACTTACCC
GTTAACCTTGAACTGCCTAATGCTTGATGGCACTTCAAGAATGTCCATTA
GAGGCCAAAGTTTGTACCACACATTTTCCTGTGCCACATGGTCTGAATAT
ATGGTTATAAATGCGAATTATGTCGTCAAGATTCATCCGAGCATAGCTCC
TTCGCATGCTAGCTTCCTTTCATGTGGATATTCAACTGGATTCGGGGCAG
CTTGGAAAGATGCTAAGGTTGAGGAGGGTTCAAGCGTAGCTGTTTTCGGT
CTTGGAACTGTTGGATTAGGGGTCGTTGAGGGAGCTAGAATTCAAGGTGC
AACTAAGATAATTGGTATAGACAAGAATCCAAGAAAAAAGGAGAACGGAC
ATGTTTTTGGAATGACAGATTTTATAAACCCTGATGGTTCAGATAAATAT
TCTATCTGTGAATCAGTTCGAGCCCTAACTGATGGAAAGGGTGTGGATTA
TAGCTTTGAGTGCTCTGGGGTTGCACCATTGGTCAATGAAGCCATTGAAT
CCACAAAAATAGGAACAGGAAAAACCATTCTGATGGGCATAGGAGATCAT
CAAAGCCTGCAGATAAATTTCCTACCCCTTCTGTGTGGCAGAACTTTAAA
GGGGTGTGTTTATGGAGGCATCAAAACCATATCTGACCTTCCCATTCTTC
TTGAAAAATGCAGAAATAAGGAAATCCATCTTGATGAACTCTTGACTCAT
GAAGTTCAGCTAGAAGATATAAACAAGGCATTTGAGCTGTTGAAGCAACC
AGATTGTGTCAAGGTTCTGGTCAAGATTTGA
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protein sequence of Tc05v2_p018180.1

>Tc05v2_p018180.1 ID=Tc05v2_p018180.1|Name=Tc05v2_p018180.1|organism=Theobroma cacao|type=polypeptide|length=427bp
MSNSSSQLITCKVSLEFSKVVLIKTVLSYCFSLNSEGWDYSYFLLFFATL
ISLMLVLWSNMAAIVCWGKGEPLKVEEIQVEPPKSSEVRVKMLCASVCHS
DILSTRGFPSPLFPRVMGHEGVGVVESICEEVNGLKQGDVVIPTYVAECQ
TCENCTSENTNLCLTYPLTLNCLMLDGTSRMSIRGQSLYHTFSCATWSEY
MVINANYVVKIHPSIAPSHASFLSCGYSTGFGAAWKDAKVEEGSSVAVFG
LGTVGLGVVEGARIQGATKIIGIDKNPRKKENGHVFGMTDFINPDGSDKY
SICESVRALTDGKGVDYSFECSGVAPLVNEAIESTKIGTGKTILMGIGDH
QSLQINFLPLLCGRTLKGCVYGGIKTISDLPILLEKCRNKEIHLDELLTH
EVQLEDINKAFELLKQPDCVKVLVKI*
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