Tc05v2_t016630.1

Overview
NameTc05v2_t016630.1
Unique NameTc05v2_t016630.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length654
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 5 ESTs, 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
Productphotosystem I reaction center subunit XI, chloroplastic
NotePhotosystem I reaction center subunit XI, chloroplastic
Cross References
External references for this mRNA
DatabaseAccession
GeneID18599375
GenbankXM_007029319.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc05v2_g016630Tc05v2_g016630Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc05v2_p016630.1Tc05v2_p016630.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto287100auto287100Theobroma cacaoexon
exon-auto287101auto287101Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto287102auto287102Theobroma cacaoCDS
CDS-auto287103auto287103Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc05v2_t016630.1 ID=Tc05v2_t016630.1|Name=Tc05v2_t016630.1|organism=Theobroma cacao|type=mRNA|length=654bp
ATGGCAGCTGCTTCTCCCATGGCTAGCCACCTAAAGTCCAGCTTCACTTC
ACCAATTTCAAGGGCATTGGTCTCACCCAAGGTTCCCTTTGCCTCTCCAC
TTAGAGTCTTGCCTTCTAGGAGGCAATCTTCCTTCACCATCAGAGCCGTC
CAATCTGAAAAGCCAACGTACCAAGTAATTCAGCCCATCAATGGTGACCC
ATTTATTGGAAGCCTAGAAACCCCAATCACATCAAGCCCATTGATTGCTT
GGTACCTCTCCAACCTCCCGGCTTACAGGACAGCAGTGAGCCCACTTCTG
AGGGGAATCGAGGTGGGTCTGGCCCATGGATTCCTCCTTGTAGGACCATT
TGTTAAGGCAGGGCCTTTGAGGAGCACCCCCGTCGCTGGGGGAGCAGGAA
GCCTGGCAGCTGCTGGTCTTGTGGTTATACTAAGCATTTGCTTGTCAATG
TACGGAGTTGCATCGTTTAAGGAAGGAGAGCCATCCACCGCACCTTCTTT
AACCTTGACTGGGCGGAAGAAGGAGCCAGACCAGCTGCAAACAGCTGAGG
GATGGGCTAGTTTCACTGGAGGATTCTTCTTTGGGGGAATTTCTGGTGTC
ACGTGGGCCTACTTCCTCCTTTATGTCCTAAACCTTCCTTACTTCTTCAA
GTAG
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protein sequence of Tc05v2_p016630.1

>Tc05v2_p016630.1 ID=Tc05v2_p016630.1|Name=Tc05v2_p016630.1|organism=Theobroma cacao|type=polypeptide|length=218bp
MAAASPMASHLKSSFTSPISRALVSPKVPFASPLRVLPSRRQSSFTIRAV
QSEKPTYQVIQPINGDPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLL
RGIEVGLAHGFLLVGPFVKAGPLRSTPVAGGAGSLAAAGLVVILSICLSM
YGVASFKEGEPSTAPSLTLTGRKKEPDQLQTAEGWASFTGGFFFGGISGV
TWAYFLLYVLNLPYFFK*
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