Tc05v2_t015840.1

Overview
NameTc05v2_t015840.1
Unique NameTc05v2_t015840.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length2085
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 3 ESTs, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
Productglutamine--fructose-6-phosphate aminotransferase [isomerizing] 2
NoteGlutamine-fructose-6-phosphate transaminase (Isomerizing)s,sugar binding,transaminases isoform 1
Cross References
External references for this mRNA
DatabaseAccession
GeneID18599279
GenbankXM_007029181.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc05v2_g015840Tc05v2_g015840Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc05v2_p015840.1Tc05v2_p015840.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto285606auto285606Theobroma cacaoexon
exon-auto285607auto285607Theobroma cacaoexon
exon-auto285608auto285608Theobroma cacaoexon
exon-auto285609auto285609Theobroma cacaoexon
exon-auto285610auto285610Theobroma cacaoexon
exon-auto285611auto285611Theobroma cacaoexon
exon-auto285612auto285612Theobroma cacaoexon
exon-auto285613auto285613Theobroma cacaoexon
exon-auto285614auto285614Theobroma cacaoexon
exon-auto285615auto285615Theobroma cacaoexon
exon-auto285616auto285616Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto285617auto285617Theobroma cacaoCDS
CDS-auto285618auto285618Theobroma cacaoCDS
CDS-auto285619auto285619Theobroma cacaoCDS
CDS-auto285620auto285620Theobroma cacaoCDS
CDS-auto285621auto285621Theobroma cacaoCDS
CDS-auto285622auto285622Theobroma cacaoCDS
CDS-auto285623auto285623Theobroma cacaoCDS
CDS-auto285624auto285624Theobroma cacaoCDS
CDS-auto285625auto285625Theobroma cacaoCDS
CDS-auto285626auto285626Theobroma cacaoCDS
CDS-auto285627auto285627Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc05v2_t015840.1 ID=Tc05v2_t015840.1|Name=Tc05v2_t015840.1|organism=Theobroma cacao|type=mRNA|length=2085bp
ATGTGTGGGATATTTGCTTATTTGAATTACAACGTGCACAGAGAAAGAAG
GTACATTCTTCAGGTTCTCTTCAATGGCCTTCGTCGTCTCGAGTACAGAG
GCTACGATTCCGCTGGAATTTCCATCGACAACGACGTCGCATTTTCTCGC
GATCCGAACACCCCTCAATCATCCTCCAACCCCTCTCTCTTCCCTTCCCC
ACTTGTTTTTCGCCAGGAAGGAAACATCGAGTCCCTCGTCAAATCCGTCT
ACGAAGAGGTAGCTGCAACAGAGTTGAATTTGGAGGAATCCTTTTCTATC
CATGCTGGGATAGCACACACCCGGTGGGCTACCCATGGGGAGCCTGCTCC
AAGGAATAGTCATCCGCAGACTTCTGGTTCTGGAAATGACTTCTTGGTTG
TTCACAATGGTGTTATCACTAATTATGAGGTCTTGAAAGAGACCCTGGTT
CGACATGGATTCACTTTTGAATCTGAAACAGACACGGAAGTAATACCAAA
GCTTGCCAAATTTGTTTTTGACAAAGCAAATGAAGAAGGTGACGACGCTG
TCACATTTAGTCAAGTAGTGCTTGAGGTTATGAGGCATCTTGAGGGAGCT
TATGCTCTCATTTTCAAAAGTCGGCATTATCCAAATGAGCTTATTGCTTG
CAAACGTGGTAGTCCATTGCTCTTAGGTGTCAAAGAATTAAATGAAGGTG
TGTGCAATGCATCGGCATTTCATGATGCTAAGTTTCTGTCAAAGAATGGC
AATCCTAAGGAACTTTTTCTATCAAGTGATGCGAATGCTCTTATTGAACA
CACAAAGAAAGTTCTGGTTATCGAGGATGGGGAAGTAGTTCATCTCAAGG
AAGGGGGTGTATCAATCCTAAAATTTGATAATGAAAAAGGAAGAAATGGT
GGTAGTCTTTCTAGGCCTGCATCAGTGCAACGTGCATTATCTATTCTTGA
GATGGAGGTTGAGCAAATAAATAAGGGAAAATATGAGCATTATATGCAGA
AAGAAATTCATGAACAGCCAGAATCTTTAACAACTACAATGAGAGGGAGG
CTTATACGTGGAGGTTCCTGTAAAGCTAAGACTGTTCTTTTGGGTGGATT
GAAGGATCACCTTAAAACAATTAGGCGTAGCCGAAGGATTGTGTTTATTG
GTTGCGGTACAAGCTACAATGCTGCTCTAGCTGCTAGACCCATCTTGGAA
GAACTCTCTGGGGTGCCTGTTACAATGGAAATTGCTAGTGATCTATTGGA
TCGGCAAGGTCCTATATACAGAGAGGATACAGCAGTTTTTGTCAGTCAAT
CTGGTGAAACGGCTGATACATTGCATGCCCTAGAATATGCTCTGGAAAAT
GGTGCATTATGTGTTGGCATAACAAATACTGTTGGTAGTGTAATAGCACG
GAAGACACACTGTGGGGTTCATATAAATGCTGGATGTGAGATTGGTGTTG
CAAGTACCAAGGCATATACAAGTCAAATAGTAGTGATGGCCATTTTAGCT
CTGGCAATTGGAGGTGACACAATTTCTAATCAAGAGAGAAGGGAGGCTAT
AATAGATGGTCTATTTGACCTGCCAAACAAAATCAGGGACGTGTTGAAGC
TTGACCAGGAAATGAAGGATCTTGCAAAGTTATTGATCGCTGAGCAGTCA
CTTCTTGTCTTTGGGAGAGGATACAACTATGCAACTGCTTTGGAAGGTGC
TTTAAAAGTGAAGGAAGTGGCTCTTATGCACAGTGAAGGGATACTTGCTG
GTGAAATGAAACATGGTCCCTTAGCATTAGTTGATGAAAATCTTCCAATT
GTTGTGATTGCTACCCGTGATGCTTGCTTCAGCAAGCAGCAGTCAGTTAT
TCAGCAACTTCATGCCCGCAAAGGTCGCTTAATAGTAATGTGTTCAAAAG
GGGATGCTGCATCAGTGTGTTCTGGAGGAGCCTGTCGAGTAATTGAAGTT
CCCTACGTTGAGGACTGTCTTCAACCTGTGGTTAATGTAGTTCCATTACA
GTTACTGGCATATCACCTCACTGTTCTAAGGGGATACAACGTTGACCAGC
CTCGGAATCTTGCAAAGAGCGTGACCACACAGTGA
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protein sequence of Tc05v2_p015840.1

>Tc05v2_p015840.1 ID=Tc05v2_p015840.1|Name=Tc05v2_p015840.1|organism=Theobroma cacao|type=polypeptide|length=695bp
MCGIFAYLNYNVHRERRYILQVLFNGLRRLEYRGYDSAGISIDNDVAFSR
DPNTPQSSSNPSLFPSPLVFRQEGNIESLVKSVYEEVAATELNLEESFSI
HAGIAHTRWATHGEPAPRNSHPQTSGSGNDFLVVHNGVITNYEVLKETLV
RHGFTFESETDTEVIPKLAKFVFDKANEEGDDAVTFSQVVLEVMRHLEGA
YALIFKSRHYPNELIACKRGSPLLLGVKELNEGVCNASAFHDAKFLSKNG
NPKELFLSSDANALIEHTKKVLVIEDGEVVHLKEGGVSILKFDNEKGRNG
GSLSRPASVQRALSILEMEVEQINKGKYEHYMQKEIHEQPESLTTTMRGR
LIRGGSCKAKTVLLGGLKDHLKTIRRSRRIVFIGCGTSYNAALAARPILE
ELSGVPVTMEIASDLLDRQGPIYREDTAVFVSQSGETADTLHALEYALEN
GALCVGITNTVGSVIARKTHCGVHINAGCEIGVASTKAYTSQIVVMAILA
LAIGGDTISNQERREAIIDGLFDLPNKIRDVLKLDQEMKDLAKLLIAEQS
LLVFGRGYNYATALEGALKVKEVALMHSEGILAGEMKHGPLALVDENLPI
VVIATRDACFSKQQSVIQQLHARKGRLIVMCSKGDAASVCSGGACRVIEV
PYVEDCLQPVVNVVPLQLLAYHLTVLRGYNVDQPRNLAKSVTTQ*
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