Tc05v2_t015820.1

Overview
NameTc05v2_t015820.1
Unique NameTc05v2_t015820.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1008
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 1 EST, 26 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
Productflavonol synthase/flavanone 3-hydroxylase
NoteFlavonol synthase/flavanone 3-hydroxylase
Cross References
External references for this mRNA
DatabaseAccession
GeneID18599277
GenbankXM_018120770.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc05v2_g015820Tc05v2_g015820Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc05v2_p015820.1Tc05v2_p015820.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto285589auto285589Theobroma cacaoexon
exon-auto285590auto285590Theobroma cacaoexon
exon-auto285591auto285591Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto285592auto285592Theobroma cacaoCDS
CDS-auto285593auto285593Theobroma cacaoCDS
CDS-auto285594auto285594Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc05v2_t015820.1 ID=Tc05v2_t015820.1|Name=Tc05v2_t015820.1|organism=Theobroma cacao|type=mRNA|length=1008bp
ATGGAGGTGGAGCGAGTCCAAGCTATTGCTTTGTCGTCTCTAACTAAAGA
CAGTATCCCAACAGAGTTTATTCGGCCAGAGGAGGAACAACCTGCAATCA
CAACATTTCATGGTCCGGTCCCTGAAATCCCCGTCATCGATCTCGATGAC
CATGATCAGGAAAAGGTTATCCGTTTGATTGCCAATGCTAGCAGGGATTG
GGGGATATTCCAGGTTGTAAACCATGGCATACCCTTTGATCTCATTGAAA
AGCTACAACAAGTGGGCAAGGAGTTTTTTGATCTGCCACAGGAAGAGAAA
GAACTGTATGCTAAGCCAAGTGGTGCACAGACAATTGAAGGTTATGGAAG
CAAGCTTGGAAAAGATCTTCAAGGAAAGAAGAATTGGGCTGATCACCTTT
TCCACAGGATATGGCCTCCTTCACGCATCAACTACCAGTTCTGGCCCCAG
AACCCCCCCTCTTACAGAGCGGTGAACGAGGAGTATGCAGAGTACATGAG
AAGGGTAGTGGACAAGCTGTTCAAATGCCTGTCAATAGGGCTAGGGCTTG
CACCCCATGCCATTAAAGAAGGAGCAGGAGGTGAGGAGATGGAGTATTTG
ATGAAGATAAACTACTATCCGACATGTCCTCGTCCCGATCTAGCTCTGGG
AGTCGCTTCTCACACTGATCTTTCTGCCATAACCGTTCTTGTGCCCAACG
ACGTCCCTGGGTTGCAAGTCTTCAAGGATGGCCTCTGGATCGATGCCAAA
TACATCCCTGGCGCCCTCATTATTCACATTGGCGACCAGATTGAGATACT
AAGCAATGGAAAATACAAGGCTGTACTGCACAGGACCACAGTGGACAAGG
AAAAAACGAGGATGTCATGGCCGGTATTCTTGGAACCGCCAGGGGAATTT
GTGGTTGGGCCGCTTCCTCAGCTTGCCGACGAACAAAATCCTCCCAAATA
TAAGGCCAAGAGATTCAAGGACTATAGTTATTGTAAACTGAACAAGCTGC
CCCAGTAA
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protein sequence of Tc05v2_p015820.1

>Tc05v2_p015820.1 ID=Tc05v2_p015820.1|Name=Tc05v2_p015820.1|organism=Theobroma cacao|type=polypeptide|length=336bp
MEVERVQAIALSSLTKDSIPTEFIRPEEEQPAITTFHGPVPEIPVIDLDD
HDQEKVIRLIANASRDWGIFQVVNHGIPFDLIEKLQQVGKEFFDLPQEEK
ELYAKPSGAQTIEGYGSKLGKDLQGKKNWADHLFHRIWPPSRINYQFWPQ
NPPSYRAVNEEYAEYMRRVVDKLFKCLSIGLGLAPHAIKEGAGGEEMEYL
MKINYYPTCPRPDLALGVASHTDLSAITVLVPNDVPGLQVFKDGLWIDAK
YIPGALIIHIGDQIEILSNGKYKAVLHRTTVDKEKTRMSWPVFLEPPGEF
VVGPLPQLADEQNPPKYKAKRFKDYSYCKLNKLPQ*
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