Tc05v2_t014880.2

Overview
NameTc05v2_t014880.2
Unique NameTc05v2_t014880.2
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length375
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
Productuncharacterized LOC18599155, transcript variant X2
NoteUncharacterized protein
Cross References
External references for this mRNA
DatabaseAccession
GeneID18599155
GenbankXM_018120559.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc05v2_g014880Tc05v2_g014880Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc05v2_p014880.2Tc05v2_p014880.2Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto283290auto283290Theobroma cacaoexon
exon-auto283291auto283291Theobroma cacaoexon
exon-auto283292auto283292Theobroma cacaoexon
exon-auto283293auto283293Theobroma cacaoexon
exon-auto283294auto283294Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto283295auto283295Theobroma cacaoCDS
CDS-auto283296auto283296Theobroma cacaoCDS
CDS-auto283297auto283297Theobroma cacaoCDS
CDS-auto283298auto283298Theobroma cacaoCDS
CDS-auto283299auto283299Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc05v2_t014880.2 ID=Tc05v2_t014880.2|Name=Tc05v2_t014880.2|organism=Theobroma cacao|type=mRNA|length=375bp
ATGGGGACAAGAGAGGTATACGAGGAAAAACTAAGACATGGGAATCTCTA
CCATGATCCAACCATCAACCCTGGCTTAGGTTCCGCTCGTTGCCCTCGTT
GTCTCTCTCTCTTAAACCCTGATTCTGACAAAGCCGAATGGACCATTACT
TCGGTTTTACATGACGCAACTGCCGTGGCTGGCTCTGGTATTGGGGGAAT
GCTTAGTGCTGTACATGGTTTCAATACAGATTCCTCTGCTGCTAATGTTT
TCAGGTGTCAGTGCAGCATTTGGAGGTTATGCACTTCCAAAGTTTGCTCA
ACTCACTGTGACTTCCTATTATGCTGCCTCAAGTGCCTCACATTATGGAA
TTTCACTCCTCACTCGACATGTTGA
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protein sequence of Tc05v2_p014880.2

>Tc05v2_p014880.2 ID=Tc05v2_p014880.2|Name=Tc05v2_p014880.2|organism=Theobroma cacao|type=polypeptide|length=125bp
MGTREVYEEKLRHGNLYHDPTINPGLGSARCPRCLSLLNPDSDKAEWTIT
SVLHDATAVAGSGIGGMLSAVHGFNTDSSAANVFRCQCSIWRLCTSKVCS
THCDFLLCCLKCLTLWNFTPHSTC*
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