Tc05v2_t014060.1

Overview
NameTc05v2_t014060.1
Unique NameTc05v2_t014060.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1545
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 1 EST, 14 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
Product3,9-dihydroxypterocarpan 6A-monooxygenase
Note3,9-dihydroxypterocarpan 6A-monooxygenase
Cross References
External references for this mRNA
DatabaseAccession
GeneID18599060
GenbankXM_018121118.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc05v2_g014060Tc05v2_g014060Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc05v2_p014060.1Tc05v2_p014060.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto281963auto281963Theobroma cacaoexon
exon-auto281964auto281964Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto281965auto281965Theobroma cacaoCDS
CDS-auto281966auto281966Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc05v2_t014060.1 ID=Tc05v2_t014060.1|Name=Tc05v2_t014060.1|organism=Theobroma cacao|type=mRNA|length=1545bp
ATGGTTGATTCACAAGATTACATCATTGTCTTCCTTATCTGGTTAATAAC
CATCATCTTTCTCCGAGCTATCCTCAGCAAAAAACGAGGCAAAGCTCATC
TTCCACCAAGCCCACGTGCTCTACCAATTATTGGACACATGCACCTCATT
GGCCCTATACCTCACCAAGCTCTTACCAAGCTCTCAAACTGCTATGGACC
TTTGATTTATTTCTATATTGGATCAAAACCTTGTGTGCTTGTTTCCTCTC
AAGAACTGGCAAAAGAAGTATTCAAAAATCATGAAACTACTTTCCTAAAC
CGGCCAAAAATGGCCAATCTTGATTACCTCACGTACGGCACATCTGATAT
GGCGATGGCACCATATGGACCCCTTTGGAAGTTCATGAAGAAACTTTGCA
TGTCTGAACTTCTGGGGACTCGAACATTAGACCAGCTCCTTCCAGTCAGA
CGTGAGGAGATGAAGCGATTTGTAAAAATAATAAAAGAGAAAGCTGAGGC
AGGGGAGGTAGTTGACATTGGAGTAGAACTCATGAGGCTGACAAATAACA
TAATATCAAGAATGTTGCTGAGCAAGAGGTGTTCAGATAAAGAAGATGAA
GCCAACGAAGTGCAGACGTTAGTGAAAGAGATGAATAATCTTGGCACAAA
GTTTAATTTGTCAGATTTATTTTGGTTTTGTAAGAATTTAGACCTGCAGG
GCTTCAGGAAAAGGCTTAAGGATGTCCGGGACAGATATGACATTCTGATG
GAGAAAATCATATTGGAGCACAAAGAGGCAAGAAACAAGAATGGAGCTGG
AGGTGACAGAATCAAAGATGTGCTTGATATTTTGATCGACATATCAGAGG
ATGAAAATGCTGAGATGAAATTGACCAGAGAAAACATAAAAGCCTTTGTT
ATGAACTTTTTTGGGGCTGGGACAGATACATCTTCCATTACTATAGGGTG
GGGAGTATCAGAGTTAATTAATCATCCAAGGGTGATGGAGAAAGCACGTA
AAGAGATTGACACTGTGGTTGGAAAGAACAGAATACTGGAGGAATCTGAC
GTAGAATATCTCCCATATCTCCAAGCAATAGTAAAGGAAACTCTAAGGCT
TCACCCTGGGGGACCATTAGTTGTAAGAGAGTCAACAGAAGATTGTATCA
TTGACGGTTATGATATTCCAGAAGGAACCAGGCTTTTTGTCAATGTGTGG
GCTCTTGGCAGAGATCCAAAGCAATGGGAAAACCCCCTTGAGTTCATACC
AGAGCGATTTCTTAGTGAAGAATGGAGGCAAGGAAAAAACCAATTTTTGG
ATGTAAGGGGACAACACTTCAGCCTGTTGCCATTTGGGAGTGGAAGAAGA
AGCTGCCCTGGAGCTTCACTAGCTCTACAGGTTGTCCCAACAGTCCTTGG
GATAATAATACAATGCTTTGATTGGAAGGTTGATGGAGAAAATGATACTG
TTAATATGGAAGAAAAGGCTGGAATGACTCTTCTTAGAGCCTACCCCTTG
GTTTGTTACCCTATGGCTAGGCTCTCTCCATTTCCATCAATTTGA
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protein sequence of Tc05v2_p014060.1

>Tc05v2_p014060.1 ID=Tc05v2_p014060.1|Name=Tc05v2_p014060.1|organism=Theobroma cacao|type=polypeptide|length=515bp
MVDSQDYIIVFLIWLITIIFLRAILSKKRGKAHLPPSPRALPIIGHMHLI
GPIPHQALTKLSNCYGPLIYFYIGSKPCVLVSSQELAKEVFKNHETTFLN
RPKMANLDYLTYGTSDMAMAPYGPLWKFMKKLCMSELLGTRTLDQLLPVR
REEMKRFVKIIKEKAEAGEVVDIGVELMRLTNNIISRMLLSKRCSDKEDE
ANEVQTLVKEMNNLGTKFNLSDLFWFCKNLDLQGFRKRLKDVRDRYDILM
EKIILEHKEARNKNGAGGDRIKDVLDILIDISEDENAEMKLTRENIKAFV
MNFFGAGTDTSSITIGWGVSELINHPRVMEKARKEIDTVVGKNRILEESD
VEYLPYLQAIVKETLRLHPGGPLVVRESTEDCIIDGYDIPEGTRLFVNVW
ALGRDPKQWENPLEFIPERFLSEEWRQGKNQFLDVRGQHFSLLPFGSGRR
SCPGASLALQVVPTVLGIIIQCFDWKVDGENDTVNMEEKAGMTLLRAYPL
VCYPMARLSPFPSI*
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