Tc05v2_t013780.1

Overview
NameTc05v2_t013780.1
Unique NameTc05v2_t013780.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1566
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 4 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
Product3,9-dihydroxypterocarpan 6A-monooxygenase
NotePutative 3,9-dihydroxypterocarpan 6A-monooxygenase
Cross References
External references for this mRNA
DatabaseAccession
GeneID18599026
GenbankXM_018120988.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc05v2_g013780Tc05v2_g013780Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc05v2_p013780.1Tc05v2_p013780.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto281397auto281397Theobroma cacaoexon
exon-auto281398auto281398Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto281399auto281399Theobroma cacaoCDS
CDS-auto281400auto281400Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc05v2_t013780.1 ID=Tc05v2_t013780.1|Name=Tc05v2_t013780.1|organism=Theobroma cacao|type=mRNA|length=1566bp
ATGGCCACTACTAAAGATGGACTTCTTTACTATGGCTCCTTGCTCTTAGT
TTCGTTCATTTGCACCTATCTCCTTCAGTTCCTTTCAAAGAAGTTGTCCA
GTTATGGACGCGCCCGGGCTCGACACCTTCCGAGCCCACCAGGTCTACCC
ATCATTGGCCACCTCCATCACCTGCTGCTAAGCTCCAGTAGTTTTCCAAA
GAAACTGCATAGCCTAGCCACTCGTTATGGCCCACTCTTGCAGCTTCAAA
TGGGAGCAGCAACATGTGTCCTGGTCTCCAACGCCAATTTTGCCAAAGAA
ATCTTGAAAACCCAGGAGCTTAATTTCGTCTACCGTCCAGAATTCGGTTC
CCCTGAATACAATATATATCATGGATCTGATTTTATCCTTGCACCATATG
GCACGTATTGGCAGTTTTTGAAGAAGCTGTGCATGACCAGACTTCTCTCT
AACTCGACGCTTAATCAATTTGTCCATATTCGGGAGCAAGAGATGGCGAA
ACTCTTGGAATATCTTATCAAGGTATCTGAAGGAAGAGAGTTTTGCGATC
TGGGCGTGCCACTAATGTCCATGATGAACAATGTAATTTGTAGAATGGCG
ATGAGCACAAGACCCTGGGAGAATGCTGACGAAGCAGAGAAGATTAAGAA
GTTGATTGAAGAGTTAGCTGTGGTTGGAGGAAAATTAAGTGCAGGGGACA
TATTAGGCCCCCTGGGAAAATTTGACCTGCTTGGCTATGGAAAAAAGCTC
AAAAAGGCACTTGAGAAGTTTGATAGATTGGTTGAGGACATCATGAAGAA
ACATGAAGAGAATACTACTGGTAGAAAAGGGAAGGATTTAATGGATATCC
TTATGGAGACTTGCAACGACCCAAGTGCTGAAGTCAAGTTGACCCGAAAG
GACATCAAGGCCTTCTTCCTGGACATGTTTATGGCCGGAACTGAAACATC
ATCAATAGCAGTGAAATGGGCCATGGGAGAGCTCATCAACCATCCACAAG
TTTTCAAGAAACTGAGACAGGAAATATCTTCAGTGGTGGGGCCTGACAGA
TTGATCAAAGAATCAGACGTGCAAAATCTCCCTTACTTACAAGCTGTTGT
GAAAGAAACCCTAAGGCTACATCCTCCGTCAGTTACTCTCCTCAGACAAA
GCAACGAAGACTGCAAGATCGACGGCTTTTATTTGAAGTCTAAGAGTCGG
ATCATTGTCAACCTTTACTCCATCATGCGGGACCCAAATTCATGGAATAG
TCCAGATGAATTCATTCCAGACAGGTTTATGGGCAACACCAATCTAAACT
CAAACAAGGAGCTAATGGAAATGAAAGGACAGAACTTCGATTACCTCCCA
TTTGGGAGTGGGCGGCGTGTATGTCCTGGAGCATCGCTTGCCTTGGCAAC
CATACATGCAACGGTTGGAGCCTTGGTTCAGTGTTTTGATTGGAAAGTCA
CAGGTGGAGAAATGGTTGATATGAGAGAGGCATCGGGGTTTGCCGCTACT
TTGGCAATGGCAAGCCCCTTGGTGTGTTATCCTGTCACACAATTTAATCC
AATTGAAGAAGGCTAG
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protein sequence of Tc05v2_p013780.1

>Tc05v2_p013780.1 ID=Tc05v2_p013780.1|Name=Tc05v2_p013780.1|organism=Theobroma cacao|type=polypeptide|length=522bp
MATTKDGLLYYGSLLLVSFICTYLLQFLSKKLSSYGRARARHLPSPPGLP
IIGHLHHLLLSSSSFPKKLHSLATRYGPLLQLQMGAATCVLVSNANFAKE
ILKTQELNFVYRPEFGSPEYNIYHGSDFILAPYGTYWQFLKKLCMTRLLS
NSTLNQFVHIREQEMAKLLEYLIKVSEGREFCDLGVPLMSMMNNVICRMA
MSTRPWENADEAEKIKKLIEELAVVGGKLSAGDILGPLGKFDLLGYGKKL
KKALEKFDRLVEDIMKKHEENTTGRKGKDLMDILMETCNDPSAEVKLTRK
DIKAFFLDMFMAGTETSSIAVKWAMGELINHPQVFKKLRQEISSVVGPDR
LIKESDVQNLPYLQAVVKETLRLHPPSVTLLRQSNEDCKIDGFYLKSKSR
IIVNLYSIMRDPNSWNSPDEFIPDRFMGNTNLNSNKELMEMKGQNFDYLP
FGSGRRVCPGASLALATIHATVGALVQCFDWKVTGGEMVDMREASGFAAT
LAMASPLVCYPVTQFNPIEEG*
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