Tc05v2_t008990.1

Overview
NameTc05v2_t008990.1
Unique NameTc05v2_t008990.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length2358
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 11 ESTs, 27 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
Productdigalactosyldiacylglycerol synthase 1, chloroplastic
NoteDigalactosyldiacylglycerol synthase 1, chloroplastic
Cross References
External references for this mRNA
DatabaseAccession
GeneID18598403
GenbankXM_018121626.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc05v2_g008990Tc05v2_g008990Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc05v2_p008990.1Tc05v2_p008990.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto270925auto270925Theobroma cacaoexon
exon-auto270926auto270926Theobroma cacaoexon
exon-auto270927auto270927Theobroma cacaoexon
exon-auto270928auto270928Theobroma cacaoexon
exon-auto270929auto270929Theobroma cacaoexon
exon-auto270930auto270930Theobroma cacaoexon
exon-auto270931auto270931Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto270932auto270932Theobroma cacaoCDS
CDS-auto270933auto270933Theobroma cacaoCDS
CDS-auto270934auto270934Theobroma cacaoCDS
CDS-auto270935auto270935Theobroma cacaoCDS
CDS-auto270936auto270936Theobroma cacaoCDS
CDS-auto270937auto270937Theobroma cacaoCDS
CDS-auto270938auto270938Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc05v2_t008990.1 ID=Tc05v2_t008990.1|Name=Tc05v2_t008990.1|organism=Theobroma cacao|type=mRNA|length=2358bp
ATGGACAACGCTACTCAAACTACGGCGGCTAATTCGAGTGCTTTCTCGTT
CATTTCGAAAGGGTGGCGAGAGGTCCGTGACTCGGCCGACGCGGATTTGC
AACTCATGAAAGATCGAGCCAACTCGTTCAAGAATCTCGCGGCGAGTTTT
GACAGAGAAATTGAGAACTTAATACACTCGGCGGCTCCAAGTTTTTCGGT
TCCGGCCATCCGTCAATCCTCGGAAATCGACTTCATGAAGAAGCTGCAGC
CTAAGATATCTGAGTTTCGGAGGGTTTATTCTGCTCCGGAGATTAGCCGG
AAAGTGATGGAGAAATGGGGGCCGAGGGCGAAGATAGGGATAGATTTGTC
AAGGATAAGGAGCGCGATAGTGGCGGAGGTGCAGGAGACGGAGGAGGAGG
ATATGGATGGAATTGTTGAATATAACAAGGTTAGGAAAGGGAGGAGGGCG
ATGTTTAGAGAGGAAGGGCAATTTGGTGATTGGGAACCAATTCGGGCGTT
GAAGACAAGGTTAAGGGAGTTTGAGAAGAAAAATTCTTCGGTGGAAATTT
TTGGTGGGTTCAAGAATAGTGAGTTTGTGGAGAAAGTTAAGTCCAGTTTG
AAAGCAATTTGCAAGGAGCCTCACGAGTCGAAGGAAGTACCCCCGCTTGA
TGTACCGGAACTGTTAGCATATTTGGTCAGGCAATCTGGGCCTCTTTTGG
ATCAACTTGGTGTCAGAAAAGATCTTTGTGACAAGATAGTTGAAGGCTTG
TGTAGCAAACGGAAGAATCAACTTGTTTTGCGCTCCCTTGCCGGGGGAGA
ACCACCTACTGTTGACAATGATAAGACAAATGATGAACTGGATCTAAGGA
TAGCCAGTGTCCTTCAAAGTACAGGGCACTGTTATGAGGGTGGCTTTTGG
ACAGACTTCATGAAGCATGATGACTCCGATGGGAAAAGGAATGTTGCCAT
TGTTACAACTGCCAGCCTTCCATGGATGACAGGAACTGCAGTAAATCCAC
TTTTTCGGGCAGCATACTTAGCAAAGTCAGCAAAACAAAATGTTACACTC
TTGGTTCCATGGCTTTGCAGATCTGATCAAGAACTAGTTTATCCCAGCAA
TCTCACTTTCAGTTCACCAGAAGAGCAGGAGAATTATATACGTAACTGGC
TTGAAGAAAGGATTGGCTTTAAGGCTGATTTCAAAATCTCCTTTTATCCA
GGAAAGTTTTCAAAAGAAAGGAGAAGTATAATACCTGCCGGAGATACCTC
TCAATTTATCTCATCAAAAGAGGCTGACATTGCTATCTTGGAAGAACCAG
AACACCTGAATTGGTACCATCATGGTAAACGGTGGACTGACAAATTCAAC
CATGTTGTTGGTATTGTTCACACAAATTACTTGGAATATATTAAGAGGGA
GAAGAATGGTGCTTTACAAGCATTTTTTGTGAAACACATCAACAATTGGG
TCACCAGAGCATATTGCCACAAGGTTCTTCGCCTTTCTGCTGCAACTCAG
GATCTACCGAAGTCTGTGATTTGCAATGTTCATGGTGTAAATCCAAAGTT
TTTGAAAATTGGGGAGAAAGTTGCTGAAGAAAGGGAACTTGGGCAGCAAG
CCTTCTCTAAAGGAGCATACTTCTTAGGCAAGATGGTCTGGGCAAAGGGA
TACAAAGAGTTGATAGATTTGCTGGCAAAGCACAAGGATGATCTTGATGG
TTTCAAGTTGGATGTGTATGGAAATGGTGAGGATGCACATGAAGTTCAGA
GTACTGCTAAAAGGTTGGATCTGAATCTTAATTTTCTGAAAGGAAGGGAC
CATGCAGATGATTCTCTTCATGGGTACAAAGTCTTCATAAACCCCAGTGT
CAGTGATGTGCTCTGCACGGCTACCGCAGAGGCACTTGCAATGGGAAAAT
TTGTAGTATGTGCAGACCATCCATCAAATGAGTTCTTTAGGTCATTTCCA
AACTGTCTGACTTACAAGACATCTGAAGACTTTGTTGCTAAAGTGAAGGA
AGCATTGGCAAATGAGCCTCAACCCCTTTCACCTGAGCAAAGATACAACC
TGTCATGGGAAGCTGCCACCCAAAGATTTGTAGAATATTCAGAGCTTGAT
AGAGTTTTGAATAATGAACATAATAGTGCAAAATTGAGAAGATCAAATGG
AAAATTAATTGCAAAATCGGTTTCAATGCCAAGTCTCTCAGAGATGGTTG
ATGGGGGGTTGGCATTTACCCACTACTGTCTCACAGGGAATGAGTTCCTT
AGACTTTGCACTGGAGCAATACCTGGTACACGGGATTATGACAAGCAACA
TTGTAAAGACCTTCATCTCTTACCTCCACAGGTGGAAAATCCTATCTATG
GCTGGTAA
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protein sequence of Tc05v2_p008990.1

>Tc05v2_p008990.1 ID=Tc05v2_p008990.1|Name=Tc05v2_p008990.1|organism=Theobroma cacao|type=polypeptide|length=786bp
MDNATQTTAANSSAFSFISKGWREVRDSADADLQLMKDRANSFKNLAASF
DREIENLIHSAAPSFSVPAIRQSSEIDFMKKLQPKISEFRRVYSAPEISR
KVMEKWGPRAKIGIDLSRIRSAIVAEVQETEEEDMDGIVEYNKVRKGRRA
MFREEGQFGDWEPIRALKTRLREFEKKNSSVEIFGGFKNSEFVEKVKSSL
KAICKEPHESKEVPPLDVPELLAYLVRQSGPLLDQLGVRKDLCDKIVEGL
CSKRKNQLVLRSLAGGEPPTVDNDKTNDELDLRIASVLQSTGHCYEGGFW
TDFMKHDDSDGKRNVAIVTTASLPWMTGTAVNPLFRAAYLAKSAKQNVTL
LVPWLCRSDQELVYPSNLTFSSPEEQENYIRNWLEERIGFKADFKISFYP
GKFSKERRSIIPAGDTSQFISSKEADIAILEEPEHLNWYHHGKRWTDKFN
HVVGIVHTNYLEYIKREKNGALQAFFVKHINNWVTRAYCHKVLRLSAATQ
DLPKSVICNVHGVNPKFLKIGEKVAEERELGQQAFSKGAYFLGKMVWAKG
YKELIDLLAKHKDDLDGFKLDVYGNGEDAHEVQSTAKRLDLNLNFLKGRD
HADDSLHGYKVFINPSVSDVLCTATAEALAMGKFVVCADHPSNEFFRSFP
NCLTYKTSEDFVAKVKEALANEPQPLSPEQRYNLSWEAATQRFVEYSELD
RVLNNEHNSAKLRRSNGKLIAKSVSMPSLSEMVDGGLAFTHYCLTGNEFL
RLCTGAIPGTRDYDKQHCKDLHLLPPQVENPIYGW*
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