Tc05v2_t008670.1

Overview
NameTc05v2_t008670.1
Unique NameTc05v2_t008670.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length858
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 1 EST, 27 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
Productprobable CCR4-associated factor 1 homolog 11
NoteProbable CCR4-associated factor 1 homolog 11
Cross References
External references for this mRNA
DatabaseAccession
GeneID18598360
GenbankXM_007027855.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc05v2_g008670Tc05v2_g008670Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc05v2_p008670.1Tc05v2_p008670.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto270199auto270199Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto270200auto270200Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc05v2_t008670.1 ID=Tc05v2_t008670.1|Name=Tc05v2_t008670.1|organism=Theobroma cacao|type=mRNA|length=858bp
ATGTCAGATACACTACCTCCTCCACGAGGGTCGGTCGTGATCCGATCCGT
TTGGTCCGACAATTTGGAGTCTGAATTCGAATTAATCAGATCCATAATTG
ACGGCTTTCCGATCATTTCCATGGACACCGAGTTCCCCGGTATTGTTGTC
AGACCGATTTCCCCCGGGGGCGGCGGCGGAGGCCAATACGCACGGCCCGG
CGACGCGAGGGCGCATTACGTCAGCCTCAAAGCGAACGTCGATTTACTCA
AGCTGATCCAAATCGGCCTTACTTTTTCGGACGGCAACGGAAATTTACCA
GATCTTGGTACAAAAAACCAGTACATTTGGGAATTCAATTTCAAAGACTT
CAATGTTGCGAATGATGCCCACGCACACGATTCCGTCGAGCTTCTTCGTC
GTCAAGGCATAGATTTCGAAAAGAACCGAGAATTAGGGATCGACTCGGTC
CGTTTCGCGGAACTCATGATGTCATCGGGACTCGTCTTAAACGACGCTGT
TACGTGGGTGACTTTCCACTGCGCGTACGATTTCGGATACCTTGTGAAAT
GCTTAACAGGTGAGTTATTACCGGACCAACTCACTGATTTCTTGAACGTC
GTGCGAATGTTCTTTGGAGACAGAGTCTACGATGTCAAACACTTGATGAG
GTTCTGCGCTGGATTATACGGAGGACTTGACCGTGCGAGTAAAGCACTGG
GAGTGGAGCGCGTGATTGGGAAGAGTCATCAGGCTGGTTCCGATAGCTTA
CTGACGTTAGACGCGTGGTTGGAGGTCAAGAAAAGGTATTTTGGGAAGGA
GGATTCGGTTGAGAAGTATGCTAATGTTCTTTATGGTTTAGAAGTTGACT
CTTTATGA
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protein sequence of Tc05v2_p008670.1

>Tc05v2_p008670.1 ID=Tc05v2_p008670.1|Name=Tc05v2_p008670.1|organism=Theobroma cacao|type=polypeptide|length=286bp
MSDTLPPPRGSVVIRSVWSDNLESEFELIRSIIDGFPIISMDTEFPGIVV
RPISPGGGGGGQYARPGDARAHYVSLKANVDLLKLIQIGLTFSDGNGNLP
DLGTKNQYIWEFNFKDFNVANDAHAHDSVELLRRQGIDFEKNRELGIDSV
RFAELMMSSGLVLNDAVTWVTFHCAYDFGYLVKCLTGELLPDQLTDFLNV
VRMFFGDRVYDVKHLMRFCAGLYGGLDRASKALGVERVIGKSHQAGSDSL
LTLDAWLEVKKRYFGKEDSVEKYANVLYGLEVDSL*
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