Tc05v2_t007920.1

Overview
NameTc05v2_t007920.1
Unique NameTc05v2_t007920.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length378
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
Productauxin-responsive protein SAUR15
NoteSAUR family protein
Cross References
External references for this mRNA
DatabaseAccession
GeneID18598265
GenbankXM_007027728.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc05v2_g007920Tc05v2_g007920Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc05v2_p007920.1Tc05v2_p007920.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto269078auto269078Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto269079auto269079Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc05v2_t007920.1 ID=Tc05v2_t007920.1|Name=Tc05v2_t007920.1|organism=Theobroma cacao|type=mRNA|length=378bp
ATGTTGGGAAAAAAAATTGTTTCCTTAAAGAAGCTAGCCAAGAAAGTGAA
GGGCATGGGTGGAGGTGATCGCGAGCAATCACAATATGAATGCTTGCTAA
GGCAATTTGAGGAAATGTCTCCTACTGCATCGACCCCATCTGGATTTTTT
GCTGTTTATGTAGGAGAGGAGGAAGAAAGATTTGTAGTGCCAACCAGCTT
CCTGTCTCATCCACTCTTCAAGATGTTGCTGGAGAAATCGTACAATGAAT
ACGGTTTTGAGCAAAGGAATAAGCTAGTTGTTCCGTGCAGTGTCTCTACA
TTTCAAGAAGTTGTGAATGCTGTAGAATGTTGTAATGGGAAATTTGATTT
TGGAAAACTAGTTGAGGAGTTTCTTTAG
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protein sequence of Tc05v2_p007920.1

>Tc05v2_p007920.1 ID=Tc05v2_p007920.1|Name=Tc05v2_p007920.1|organism=Theobroma cacao|type=polypeptide|length=126bp
MLGKKIVSLKKLAKKVKGMGGGDREQSQYECLLRQFEEMSPTASTPSGFF
AVYVGEEEERFVVPTSFLSHPLFKMLLEKSYNEYGFEQRNKLVVPCSVST
FQEVVNAVECCNGKFDFGKLVEEFL*
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