Tc05v2_t006780.1

Overview
NameTc05v2_t006780.1
Unique NameTc05v2_t006780.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1584
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 10 ESTs, 24 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
Productpyruvate kinase 1, cytosolic
NotePyruvate kinase 1, cytosolic
Cross References
External references for this mRNA
DatabaseAccession
GeneID18598132
GenbankXM_007027517.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc05v2_g006780Tc05v2_g006780Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc05v2_p006780.1Tc05v2_p006780.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto266846auto266846Theobroma cacaoexon
exon-auto266847auto266847Theobroma cacaoexon
exon-auto266848auto266848Theobroma cacaoexon
exon-auto266849auto266849Theobroma cacaoexon
exon-auto266850auto266850Theobroma cacaoexon
exon-auto266851auto266851Theobroma cacaoexon
exon-auto266852auto266852Theobroma cacaoexon
exon-auto266853auto266853Theobroma cacaoexon
exon-auto266854auto266854Theobroma cacaoexon
exon-auto266855auto266855Theobroma cacaoexon
exon-auto266856auto266856Theobroma cacaoexon
exon-auto266857auto266857Theobroma cacaoexon
exon-auto266858auto266858Theobroma cacaoexon
exon-auto266859auto266859Theobroma cacaoexon
exon-auto266860auto266860Theobroma cacaoexon
exon-auto266861auto266861Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto266862auto266862Theobroma cacaoCDS
CDS-auto266863auto266863Theobroma cacaoCDS
CDS-auto266864auto266864Theobroma cacaoCDS
CDS-auto266865auto266865Theobroma cacaoCDS
CDS-auto266866auto266866Theobroma cacaoCDS
CDS-auto266867auto266867Theobroma cacaoCDS
CDS-auto266868auto266868Theobroma cacaoCDS
CDS-auto266869auto266869Theobroma cacaoCDS
CDS-auto266870auto266870Theobroma cacaoCDS
CDS-auto266871auto266871Theobroma cacaoCDS
CDS-auto266872auto266872Theobroma cacaoCDS
CDS-auto266873auto266873Theobroma cacaoCDS
CDS-auto266874auto266874Theobroma cacaoCDS
CDS-auto266875auto266875Theobroma cacaoCDS
CDS-auto266876auto266876Theobroma cacaoCDS
CDS-auto266877auto266877Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc05v2_t006780.1 ID=Tc05v2_t006780.1|Name=Tc05v2_t006780.1|organism=Theobroma cacao|type=mRNA|length=1584bp
ATGCATTCGAGTCATCTACTTCTAGAAGAGCCCATCAGGATGGCTTCAAT
CCTGGAGCCATCGAAGGCTAGTTTTTTCCCGGCAATGACGAAGATAGTTG
GAACTTTGGGTCCTAAGTCTCGATCTGTAGATGTTATTTCCGGTTGCCTT
AAAGCTGGAATGTCCGTGGCTAGGTTCGATTTTTCGTGGCGTGACGCGGA
GTATCATCAAGAAACTTTAGAAAATTTGAAGGCAGCCGTAAAGAGCACTA
AGAAGCTTTGTGCGGTTATGTTGGATAGTGTGGGTCCTGAGTTGCAGGTT
GTTAATAAAAGCGAGAAAGCCATCTCACTTCAGGCAGATGCTACCGTTAT
CTTGACGCCAGATGAAGGACAAGAGGCCTCTTCAGAATTATTGCCAATCA
ATTTTGATGGATTGTCAGAGGCGGTGAAGAAGGGAGACACTATTTTTATT
GGTCAGTACCTGTTTACCGGGAGTGAAACCACGTCTGTATGGCTTGAGGT
TAGTGAGGTGAAGGGAAATGATGTGGTTTGTGTGATAAAGAACTCTGCAA
CATTGGCTGGGTCATTGTTCACTTTGCATGCCTCTCAAATTCGTATTGAT
TTGCCTACTCTCTCTGATAAAGATAAGGAGGTTATAAGTACCTGGGGAGT
TCAAAACAAAATCGACTTCCTCTCACTATCATATACACGACATGCAGAAG
ATGTTCGGCATGCACGCGAGTTCCTTTCAAAGTTGGGTGACCTCTACCAG
ACACAAATTTTTGCCAAGATTGAAAACATAGAGGGATTGAACCATTTTGA
TGAGATTCTAAAGGAAGCAGATGGAATCATTCTTTCCCGTGGAAATTTGG
GCATTGATCTCCCACCTGAGAAGGTGTTCTTATTTCAGAAAGCTGCTCTT
TACAAGTGTAACATGGCTGGAAAGCCTGCAGTGGTCACTCGTGTTGTGGA
CAGTATGACTGACAACTTGAGGCCCACTCGTGCTGAGGCAACTGATGTTG
CCAATGCTGTTCTTGATGGAAGTGATGCTATTCTTCTTGGTGCTGAGACC
CTGCGTGGATTATACCCTGTTGAAACCATTTCTATTGTTGGCAAAATTTG
TGCAGAGGCAGAGAAGGTTTTCAACCAGGATCTATATTTCAAGAAGACTG
TCAAGTATGTTGGAGAACCAATGACCCACTTGGAGTCCATTGCTTCCTCT
GCGGTACGGGCTGCAATTAAGGTGAAGGCATCAGTTATTATATGTTTCAC
ATCCTCAGGGAGAGCTGCAAGATTGATTGCAAAGTACAGGCCAACAATGC
CTGTTCTCTCTGTTGTCATCCCTCGCCTTAAGACAAATCAATTGAAGTGG
AGCTTCAGTGGGGCCTTTGAGGCAAGGCAATCCCTCATTGTCAGAGGTCT
TTTCCCTATGCTTGCTGATCCACGACATCCTGCGGAGTCTACAAGCGCAA
CAAATGAGTCAGTTTTGAAGGTTGCCCTTGACCATGGGAAGGTTTCAGGA
GTTATAAAGTCACATGATCGAGTTGTTGTCTGTCAGAAGGTTGGGGATGC
TTCTGTCGTAAAGATTATTGAGCTCGACGATTAA
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protein sequence of Tc05v2_p006780.1

>Tc05v2_p006780.1 ID=Tc05v2_p006780.1|Name=Tc05v2_p006780.1|organism=Theobroma cacao|type=polypeptide|length=528bp
MHSSHLLLEEPIRMASILEPSKASFFPAMTKIVGTLGPKSRSVDVISGCL
KAGMSVARFDFSWRDAEYHQETLENLKAAVKSTKKLCAVMLDSVGPELQV
VNKSEKAISLQADATVILTPDEGQEASSELLPINFDGLSEAVKKGDTIFI
GQYLFTGSETTSVWLEVSEVKGNDVVCVIKNSATLAGSLFTLHASQIRID
LPTLSDKDKEVISTWGVQNKIDFLSLSYTRHAEDVRHAREFLSKLGDLYQ
TQIFAKIENIEGLNHFDEILKEADGIILSRGNLGIDLPPEKVFLFQKAAL
YKCNMAGKPAVVTRVVDSMTDNLRPTRAEATDVANAVLDGSDAILLGAET
LRGLYPVETISIVGKICAEAEKVFNQDLYFKKTVKYVGEPMTHLESIASS
AVRAAIKVKASVIICFTSSGRAARLIAKYRPTMPVLSVVIPRLKTNQLKW
SFSGAFEARQSLIVRGLFPMLADPRHPAESTSATNESVLKVALDHGKVSG
VIKSHDRVVVCQKVGDASVVKIIELDD*
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