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Properties
| Property Name | Value |
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| Model evidence | Supporting evidence includes similarity to: 79 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns |
| Product | putative cyclic nucleotide-gated ion channel 15, transcript variant X2 |
| Note | Putative cyclic nucleotide-gated ion channel 15 |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Tc05v2_t005320.5 ID=Tc05v2_t005320.5|Name=Tc05v2_t005320.5|organism=Theobroma cacao|type=mRNA|length=2139bp
ATGGCTTCTGGTAATTCAAAATCTGTAAGATTTCAAAATGATCCTGAGAA
GACCACTTTTACATCCACAAAGGGAGGTCATCTTTCAAAATTTATGAGCA
AGATGAATTGCAATCAAGTGCCTGAGCTGCGAACCAAAACGTTTGAGAAG
ACTGCAATTGGCAAGACTTTTCACAAGAAAGAACTCTCCAGAGTATTTTC
AGAAGACTACGAGGTAGTGGAGAAGACAATATTGGATCCTCGAGGGCCTG
ACATAAACAGATGGAACAAGCTTTTCTTAGTAGCTTGTCTGATATCTCTT
TTTGTAGACCCTTTGTTCTTTTATCTGCCACAGGCTAAGAAGAGCATGTG
CATGACTGTTTCTCTACCTCTTGAAATTGATCTCACAGTTACGCGATCAG
TAGTTGATGCTTTTTACATTATTCAGATTTTTGTTCGATTTCGAACAGCT
TATGTGGCTCCATCCTCTCGTGTGTTTGGGAGAGGAGAGCTAGTCATAGA
CCCTTCAAAGATTGCTTCAAGGTACCTGCACAAAGATTTCTGGCTTGATA
TAATCGCTGCACAACCCCTTCCACAGGTATTGGTTTGGGCTGTAATCCCC
AAATTAAGGGGTTCATCCATGGTTACTACAAAAAATATTGTTCGCCTAAT
TATCATATTCCAGTATCTCCTGAGGCTATACCTAATCTTTCCACTTTCTT
CTCAAATTATCAAGACTTCAGGGGTTGTGACAGAAACAGCATGGGCAGGG
GCTGCTTATAACCTGATGCTCTATATGCTGGCAAGTCATGTTTTAGGAGC
CTCTTGGTACCTCTTATCACTTGAACGGCAAGAAGAATGTTGGAGAAAAG
TTTGTAGTCTTCCCGTCATAGATTGCCGCTATGAGTTTTTTGACTGCAGA
TTTGTTGGTGATCCTGCCAGAGCTGCTTGGTTCAATTCAAGCAATATCTC
AGGCCTATGTGATCCAAGAAGTGATTTCTTCCAGTTTGGCATTTATGCTG
ATGCATTACAATTCGGAGTCACATCATCAGGATTCTTCAGGAAGTACTTT
TACTGCCTTTGGTGGGGGCTGAGAAATTTGAGTTCATTGGGACAGGGTCT
CTTCACAAGCACTTATGTTGGAGAAATAATATTTGCCATCATCATTGCTA
TCGTTGGATTAGTGCTTTTTGCACTTCTCATTGGAAATATGCAAACGTAT
CTCCAATCTACTACTGTTCGACTGGAAGAATGGAGGATTAGGAGGACTGA
TACGGAACAATGGATGCATCACAGGCAGCTTCCTCATGAACTAAAGCAGA
GTGTTCGAAGGTATGATCAATACAAGTGGGTCGCAACTCGGGGTGTTGAT
GAGGAAGCCATCCTGAAAAGTCTCCCTATGGATCTTCGTCGAGACATCAA
GCGCCACCTCTGCGTTGATTTAGTTCGACAAGTGCCACTCTTTGATCTGA
TGGATGATCGGATGCTAGATGCAATTTGTGAAAGGCTTAAACCATGTCTC
CGTACCCCATCCACTTGCCTAGTTCGTGAAGGTGATCCTGTAAATGAGAT
GCTTTTCATTGTCCGAGGCCACCTAGATTCCTTCACTACCAACGGTGGAC
GCACAGGATTCTTCAATTCAAGCCGGATCGGTCCAGGTGATTTCTGTGGT
GAGGAATTGTTAACTTGGGCCTTGGACCCTCGTCCAAATATCGTCCTTCC
ATCGTCTACACGCACCGTTAAGGCTATCACTGAAGTGGAAGCTTTTGCTC
TTGTTTCTGAGGACTTGAAATTTGTTGCCGCCCAGTTTCGCAGACTGCAT
AGCAAACAACTTAGGCACACATTCAGATTTCACTCGCATCAATGGAGGAC
ATGGGCTGCATGCTTCATACAAGCAGCTTGGTTTCGCTATAAGAGACGGA
AAGGGGTAGCTGAGCTCAAGAAATGGGAGAGTATGGCAGCCAGTTCACCT
GAACAAGCAACAGAACAAACGGGTGCACCAGCACTTCCTCCAGTAGCCTC
AGGCATTGCCTCATACGCAGCAAAACTGGCCGCAAGCACCAGATCAAGAG
GTGGGAGTCGGCGGTGCGGAACCGACTTTGACATACTAGGCTCTTTGCAA
AAGCCGAATGAACCTGATTTTACAGTTGAAGATAGATGA back to topprotein sequence of Tc05v2_p005320.5 >Tc05v2_p005320.5 ID=Tc05v2_p005320.5|Name=Tc05v2_p005320.5|organism=Theobroma cacao|type=polypeptide|length=713bp
MASGNSKSVRFQNDPEKTTFTSTKGGHLSKFMSKMNCNQVPELRTKTFEK
TAIGKTFHKKELSRVFSEDYEVVEKTILDPRGPDINRWNKLFLVACLISL
FVDPLFFYLPQAKKSMCMTVSLPLEIDLTVTRSVVDAFYIIQIFVRFRTA
YVAPSSRVFGRGELVIDPSKIASRYLHKDFWLDIIAAQPLPQVLVWAVIP
KLRGSSMVTTKNIVRLIIIFQYLLRLYLIFPLSSQIIKTSGVVTETAWAG
AAYNLMLYMLASHVLGASWYLLSLERQEECWRKVCSLPVIDCRYEFFDCR
FVGDPARAAWFNSSNISGLCDPRSDFFQFGIYADALQFGVTSSGFFRKYF
YCLWWGLRNLSSLGQGLFTSTYVGEIIFAIIIAIVGLVLFALLIGNMQTY
LQSTTVRLEEWRIRRTDTEQWMHHRQLPHELKQSVRRYDQYKWVATRGVD
EEAILKSLPMDLRRDIKRHLCVDLVRQVPLFDLMDDRMLDAICERLKPCL
RTPSTCLVREGDPVNEMLFIVRGHLDSFTTNGGRTGFFNSSRIGPGDFCG
EELLTWALDPRPNIVLPSSTRTVKAITEVEAFALVSEDLKFVAAQFRRLH
SKQLRHTFRFHSHQWRTWAACFIQAAWFRYKRRKGVAELKKWESMAASSP
EQATEQTGAPALPPVASGIASYAAKLAASTRSRGGSRRCGTDFDILGSLQ
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