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Properties
Property Name | Value |
Model evidence | Supporting evidence includes similarity to: 79 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns |
Product | putative cyclic nucleotide-gated ion channel 15, transcript variant X5 |
Note | Putative cyclic nucleotide-gated ion channel 15 |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Tc05v2_t005320.2 ID=Tc05v2_t005320.2|Name=Tc05v2_t005320.2|organism=Theobroma cacao|type=mRNA|length=2046bp ATGAGCAAGATGAATTGCAATCAAGTGCCTGAGCTGCGAACCAAAACGTT TGAGAAGACTGCAATTGGCAAGACTTTTCACAAGAAAGAACTCTCCAGAG TATTTTCAGAAGACTACGAGGTAGTGGAGAAGACAATATTGGATCCTCGA GGGCCTGACATAAACAGATGGAACAAGCTTTTCTTAGTAGCTTGTCTGAT ATCTCTTTTTGTAGACCCTTTGTTCTTTTATCTGCCACAGGCTAAGAAGA GCATGTGCATGACTGTTTCTCTACCTCTTGAAATTGATCTCACAGTTACG CGATCAGTAGTTGATGCTTTTTACATTATTCAGATTTTTGTTCGATTTCG AACAGCTTATGTGGCTCCATCCTCTCGTGTGTTTGGGAGAGGAGAGCTAG TCATAGACCCTTCAAAGATTGCTTCAAGGTACCTGCACAAAGATTTCTGG CTTGATATAATCGCTGCACAACCCCTTCCACAGGTATTGGTTTGGGCTGT AATCCCCAAATTAAGGGGTTCATCCATGGTTACTACAAAAAATATTGTTC GCCTAATTATCATATTCCAGTATCTCCTGAGGCTATACCTAATCTTTCCA CTTTCTTCTCAAATTATCAAGACTTCAGGGGTTGTGACAGAAACAGCATG GGCAGGGGCTGCTTATAACCTGATGCTCTATATGCTGGCAAGTCATGTTT TAGGAGCCTCTTGGTACCTCTTATCACTTGAACGGCAAGAAGAATGTTGG AGAAAAGTTTGTAGTCTTCCCGTCATAGATTGCCGCTATGAGTTTTTTGA CTGCAGATTTGTTGGTGATCCTGCCAGAGCTGCTTGGTTCAATTCAAGCA ATATCTCAGGCCTATGTGATCCAAGAAGTGATTTCTTCCAGTTTGGCATT TATGCTGATGCATTACAATTCGGAGTCACATCATCAGGATTCTTCAGGAA GTACTTTTACTGCCTTTGGTGGGGGCTGAGAAATTTGAGTTCATTGGGAC AGGGTCTCTTCACAAGCACTTATGTTGGAGAAATAATATTTGCCATCATC ATTGCTATCGTTGGATTAGTGCTTTTTGCACTTCTCATTGGAAATATGCA AACGTATCTCCAATCTACTACTGTTCGACTGGAAGAATGGAGGATTAGGA GGACTGATACGGAACAATGGATGCATCACAGGCAGCTTCCTCATGAACTA AAGCAGAGTGTTCGAAGGTATGATCAATACAAGTGGGTCGCAACTCGGGG TGTTGATGAGGAAGCCATCCTGAAAAGTCTCCCTATGGATCTTCGTCGAG ACATCAAGCGCCACCTCTGCGTTGATTTAGTTCGACAAGTGCCACTCTTT GATCTGATGGATGATCGGATGCTAGATGCAATTTGTGAAAGGCTTAAACC ATGTCTCCGTACCCCATCCACTTGCCTAGTTCGTGAAGGTGATCCTGTAA ATGAGATGCTTTTCATTGTCCGAGGCCACCTAGATTCCTTCACTACCAAC GGTGGACGCACAGGATTCTTCAATTCAAGCCGGATCGGTCCAGGTGATTT CTGTGGTGAGGAATTGTTAACTTGGGCCTTGGACCCTCGTCCAAATATCG TCCTTCCATCGTCTACACGCACCGTTAAGGCTATCACTGAAGTGGAAGCT TTTGCTCTTGTTTCTGAGGACTTGAAATTTGTTGCCGCCCAGTTTCGCAG ACTGCATAGCAAACAACTTAGGCACACATTCAGATTTCACTCGCATCAAT GGAGGACATGGGCTGCATGCTTCATACAAGCAGCTTGGTTTCGCTATAAG AGACGGAAAGGGGTAGCTGAGCTCAAGAAATGGGAGAGTATGGCAGCCAG TTCACCTGAACAAGCAACAGAACAAACGGGTGCACCAGCACTTCCTCCAG TAGCCTCAGGCATTGCCTCATACGCAGCAAAACTGGCCGCAAGCACCAGA TCAAGAGGTGGGAGTCGGCGGTGCGGAACCGACTTTGACATACTAGGCTC TTTGCAAAAGCCGAATGAACCTGATTTTACAGTTGAAGATAGATGA back to topprotein sequence of Tc05v2_p005320.2 >Tc05v2_p005320.2 ID=Tc05v2_p005320.2|Name=Tc05v2_p005320.2|organism=Theobroma cacao|type=polypeptide|length=682bp
MSKMNCNQVPELRTKTFEKTAIGKTFHKKELSRVFSEDYEVVEKTILDPR GPDINRWNKLFLVACLISLFVDPLFFYLPQAKKSMCMTVSLPLEIDLTVT RSVVDAFYIIQIFVRFRTAYVAPSSRVFGRGELVIDPSKIASRYLHKDFW LDIIAAQPLPQVLVWAVIPKLRGSSMVTTKNIVRLIIIFQYLLRLYLIFP LSSQIIKTSGVVTETAWAGAAYNLMLYMLASHVLGASWYLLSLERQEECW RKVCSLPVIDCRYEFFDCRFVGDPARAAWFNSSNISGLCDPRSDFFQFGI YADALQFGVTSSGFFRKYFYCLWWGLRNLSSLGQGLFTSTYVGEIIFAII IAIVGLVLFALLIGNMQTYLQSTTVRLEEWRIRRTDTEQWMHHRQLPHEL KQSVRRYDQYKWVATRGVDEEAILKSLPMDLRRDIKRHLCVDLVRQVPLF DLMDDRMLDAICERLKPCLRTPSTCLVREGDPVNEMLFIVRGHLDSFTTN GGRTGFFNSSRIGPGDFCGEELLTWALDPRPNIVLPSSTRTVKAITEVEA FALVSEDLKFVAAQFRRLHSKQLRHTFRFHSHQWRTWAACFIQAAWFRYK RRKGVAELKKWESMAASSPEQATEQTGAPALPPVASGIASYAAKLAASTR SRGGSRRCGTDFDILGSLQKPNEPDFTVEDR* back to top
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