Tc05v2_t004910.1

Overview
NameTc05v2_t004910.1
Unique NameTc05v2_t004910.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length294
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 2 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
Productuncharacterized LOC18597917
NoteUncharacterized protein
Cross References
External references for this mRNA
DatabaseAccession
GeneID18597917
GenbankXM_007027218.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc05v2_g004910Tc05v2_g004910Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc05v2_p004910.1Tc05v2_p004910.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto262715auto262715Theobroma cacaoexon
exon-auto262716auto262716Theobroma cacaoexon
exon-auto262717auto262717Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto262718auto262718Theobroma cacaoCDS
CDS-auto262719auto262719Theobroma cacaoCDS
CDS-auto262720auto262720Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc05v2_t004910.1 ID=Tc05v2_t004910.1|Name=Tc05v2_t004910.1|organism=Theobroma cacao|type=mRNA|length=294bp
ATGGAGCTAATCATCATCAAGGCTAGACCCATCTCCATTACTTTGGTGCT
GCTTCTTCTCCTACTTTCGGTACCTTATTTTTCAACAGGGAGCTGGGATG
TTTCGGACAGGGAGGTGTATGAGATAGATTATAGAGGTCCGGAGACACAC
TCTTCAATCCCTCCGCCCGATCATTCTCATGGCCACAGGCATTGGATTCA
TCGGGAAACCGATGCTGCAACACTCCACAAATCTTCCAAGGGCGTAAAGG
GTGGTAATAGCAAAGGAAGAAATGTCAGGAAAATTCATGGGTGA
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protein sequence of Tc05v2_p004910.1

>Tc05v2_p004910.1 ID=Tc05v2_p004910.1|Name=Tc05v2_p004910.1|organism=Theobroma cacao|type=polypeptide|length=98bp
MELIIIKARPISITLVLLLLLLSVPYFSTGSWDVSDREVYEIDYRGPETH
SSIPPPDHSHGHRHWIHRETDAATLHKSSKGVKGGNSKGRNVRKIHG*
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