Tc05v2_t004510.2

Overview
NameTc05v2_t004510.2
Unique NameTc05v2_t004510.2
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length708
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 52 ESTs, 25 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
Productglutathione S-transferase L3, transcript variant X1
NoteGlutathione S-transferase L3
Cross References
External references for this mRNA
DatabaseAccession
GeneID18597872
GenbankXM_007027125.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc05v2_g004510Tc05v2_g004510Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc05v2_p004510.2Tc05v2_p004510.2Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto261590auto261590Theobroma cacaoexon
exon-auto261591auto261591Theobroma cacaoexon
exon-auto261592auto261592Theobroma cacaoexon
exon-auto261593auto261593Theobroma cacaoexon
exon-auto261594auto261594Theobroma cacaoexon
exon-auto261595auto261595Theobroma cacaoexon
exon-auto261596auto261596Theobroma cacaoexon
exon-auto261597auto261597Theobroma cacaoexon
exon-auto261598auto261598Theobroma cacaoexon
exon-auto261599auto261599Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto261600auto261600Theobroma cacaoCDS
CDS-auto261601auto261601Theobroma cacaoCDS
CDS-auto261602auto261602Theobroma cacaoCDS
CDS-auto261603auto261603Theobroma cacaoCDS
CDS-auto261604auto261604Theobroma cacaoCDS
CDS-auto261605auto261605Theobroma cacaoCDS
CDS-auto261606auto261606Theobroma cacaoCDS
CDS-auto261607auto261607Theobroma cacaoCDS
CDS-auto261608auto261608Theobroma cacaoCDS
CDS-auto261609auto261609Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc05v2_t004510.2 ID=Tc05v2_t004510.2|Name=Tc05v2_t004510.2|organism=Theobroma cacao|type=mRNA|length=708bp
ATGGCTACTGATACCGTAGAGGTTTTGCCTCCGCCTTTGGATGCTACTGC
TGAGCAACCCCCTCTCTTTGATGGAACTACCAGGTTGTATACTTGTTATA
CTTGCCCTTTTGCACAGCGTGTGTGGATCACCAGGAATTATAAGGGGCTG
CAAGACAAGATTAAATTGGTTCCTTTGATCCTTCAAAACAGACCTGCTTG
GTACAAGGAAAAAGTTTACCCTGAAAACAAGGTGCCCGCCTTGGAACATA
ATGGGAAAATCATTGGGGAGAGTCTTGATCTAATTAAATATGTTGATAGC
AACTTTGAAGGACCTTCTCTTTTACCTGATGATCCTGAGAAAAAGAAATT
CTTTGAGGAGTTGTTATCATATCTGGACACCTTTGTACGGACAGTGTTTA
CTTCATTTAAAGGGGACCCGGCAAAAGAAGTTGGTGCTGTTTTTGATTAC
TTAGAAAATGCTCTTCAGAAATTTGATGGTCCATTCTTCCTTGGCCAGAT
TAGTCTGGCGGACATTGCCTACATTCCTTTTGTTGAAAGATTCCAGATCT
TCTTATTGGAGGCGTTTCAGTATGACATCATAGCAGGCCGGCCTAAACTG
GCAGCATGGATTGAGGAGATGAACAATATCGACGCCTATAAGCAGACAAA
AACCGATCCGAAAGAGCTAGTGGCATTTTATAAGCAGCGTTTCATGGGCC
AAAAGTGA
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protein sequence of Tc05v2_p004510.2

>Tc05v2_p004510.2 ID=Tc05v2_p004510.2|Name=Tc05v2_p004510.2|organism=Theobroma cacao|type=polypeptide|length=236bp
MATDTVEVLPPPLDATAEQPPLFDGTTRLYTCYTCPFAQRVWITRNYKGL
QDKIKLVPLILQNRPAWYKEKVYPENKVPALEHNGKIIGESLDLIKYVDS
NFEGPSLLPDDPEKKKFFEELLSYLDTFVRTVFTSFKGDPAKEVGAVFDY
LENALQKFDGPFFLGQISLADIAYIPFVERFQIFLLEAFQYDIIAGRPKL
AAWIEEMNNIDAYKQTKTDPKELVAFYKQRFMGQK*
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