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Properties
Property Name | Value |
Model evidence | Supporting evidence includes similarity to: 4 ESTs, 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns |
Product | probable pectate lyase 4, transcript variant X1 |
Note | Pectate lyase |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Tc05v2_t004200.2 ID=Tc05v2_t004200.2|Name=Tc05v2_t004200.2|organism=Theobroma cacao|type=mRNA|length=1128bp ATGGGGAACGCTCACGGCCACCGCAAGAACCGTAACAACCGCGAGCACTC TGGCTCTTACCCAACGCCTGTCCCGCCTTATTATAAATACGGTCCGCCTC CGCAGCCCCAAGTTCCAAGCCCCACGACCCAACCCCAGATGGCTCTGTCT TTGCCTTATACGAATGTCGATTCTAGTCTTCGAGCCCTTGCCGGCCAAGC TGAGGGCTTTGGTCGCTTCGCCATTGGTGGCCTCCATGGCCCTCTCTACC ATGTCACTACTTTATCAGATGATGGGCCCGGATCATTGCGTGATGGTTGC CGTAGAAAAGAACCCCTTTGGATTGTCTTTGAAGTTTCAGGAACCATTCA TCTTTCATCTTACTTGAGTGTGTCATCTTATAAGACCATTGATGGACGTG GCCAAAGGATAAAACTCACCGGAAAGGGTTTAAGGCTGAAGGAATGTGAA CATGTTATAATATGCAATTTGGAGTTTGAAGGTGGTAGAGGACCGGATGT TGATGGGATTCAAATAAAACCTAACTCCAAGCACATATGGATAGACCGTT GCAGCCTTCGTGATTATGATGATGGATTGATTGATATCACCCGAGAAAGC ACAGATATTACTGTATCTAGGTGTCACTTTTCACAGCATGACAAGACGAT ACTCATTGGAGCAGACCCCTCTCATGTCGGTGATAGATGTATCCGGGTGA CCATTCACCATTGCTTTTTTGATGGGACTCGGCAACGACATCCCCGTGTT AGATTTGGGAAGGTACATTTGTACAATAATTACACTAGACACTGGGGCAT TTATGCTGTTTGTGCCAGTGTGGAATCACAGATATACTCTCAGTGCAATA TATATGAAGCAGGGCAGAAGAAGGTGGCCTTCAAGTATCTTACCGAAAAG GCTACTGACAAAGAAGAGGCTTGCAGTGGCTGCATAAGGTCCGAAGGGGA TTTGTTTACAGCTGGAACCCAAGCAGGCCTGTTGACTGAGAATGCTAGGT CCAACTTGTTTCATCCAAGTGAATACTACCCTACATGGACAGTGGAAGCT CCAACAGATACCCTTAAACATGTTATTCAGCACTGTACAGGATGGCAGTG TGTCCCTCGACCAACTGAAGCGGCCTAG back to topprotein sequence of Tc05v2_p004200.2 >Tc05v2_p004200.2 ID=Tc05v2_p004200.2|Name=Tc05v2_p004200.2|organism=Theobroma cacao|type=polypeptide|length=376bp
MGNAHGHRKNRNNREHSGSYPTPVPPYYKYGPPPQPQVPSPTTQPQMALS LPYTNVDSSLRALAGQAEGFGRFAIGGLHGPLYHVTTLSDDGPGSLRDGC RRKEPLWIVFEVSGTIHLSSYLSVSSYKTIDGRGQRIKLTGKGLRLKECE HVIICNLEFEGGRGPDVDGIQIKPNSKHIWIDRCSLRDYDDGLIDITRES TDITVSRCHFSQHDKTILIGADPSHVGDRCIRVTIHHCFFDGTRQRHPRV RFGKVHLYNNYTRHWGIYAVCASVESQIYSQCNIYEAGQKKVAFKYLTEK ATDKEEACSGCIRSEGDLFTAGTQAGLLTENARSNLFHPSEYYPTWTVEA PTDTLKHVIQHCTGWQCVPRPTEAA* back to top
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