Tc05v2_t003510.1

Overview
NameTc05v2_t003510.1
Unique NameTc05v2_t003510.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1530
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
Productdol-P-Glc:Glc(2)Man(9)GlcNAc(2)-PP-Dol alpha-1,2-glucosyltransferase
NoteDol-P-Glc:Glc(2)Man(9)GlcNAc(2)-PP-Dol alpha-1,2-glucosyltransferase
Cross References
External references for this mRNA
DatabaseAccession
GeneID18597765
GenbankXM_007026972.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc05v2_g003510Tc05v2_g003510Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc05v2_p003510.1Tc05v2_p003510.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto259920auto259920Theobroma cacaoexon
exon-auto259921auto259921Theobroma cacaoexon
exon-auto259922auto259922Theobroma cacaoexon
exon-auto259923auto259923Theobroma cacaoexon
exon-auto259924auto259924Theobroma cacaoexon
exon-auto259925auto259925Theobroma cacaoexon
exon-auto259926auto259926Theobroma cacaoexon
exon-auto259927auto259927Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto259928auto259928Theobroma cacaoCDS
CDS-auto259929auto259929Theobroma cacaoCDS
CDS-auto259930auto259930Theobroma cacaoCDS
CDS-auto259931auto259931Theobroma cacaoCDS
CDS-auto259932auto259932Theobroma cacaoCDS
CDS-auto259933auto259933Theobroma cacaoCDS
CDS-auto259934auto259934Theobroma cacaoCDS
CDS-auto259935auto259935Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc05v2_t003510.1 ID=Tc05v2_t003510.1|Name=Tc05v2_t003510.1|organism=Theobroma cacao|type=mRNA|length=1530bp
ATGGGTAGAATAGCAGTAGCGGCAATAGTCAGCGTTTGGGTAATTCCCAT
ATCCATCCTGGTGAATCGCATTGTTCCTGATCCTTACATGGATGAGATTT
TCCACATACCTCAGGCTCAACAATACTGCAATGGCAATTTCAGGAGCTGG
GATCCCATGATCACTACCCCACCTGGCCTGTACTATCTTTCACTTGTTCA
TGTTGCTGCTTTGTTTCCGGGCAATTATTTTCTACAGTTGGCTTCATCAT
TCCCGGAAGTTTGCTCCACCGCTGCTCTTCGCTCTCTAAATGGAGTCTTG
GCAGTACTATGCAGCATTCTAGTATATGAGATAATAACCCACTTGAGGCC
AGCTCTTGATGATAGAAAAGCAACGCTTTTTGCAGCAGTTTTAGCCCTGT
ATCCACTCCACTGGTTCTTCACTTTTTTTTACTACACTGATGTTGCATCA
CTTACTGCTGTGCTCGCCATGTATCTTGCATGTCTGAAGAAGAAATATCT
ATTCAGTGCATTGCTTGGGGCCATGGCAGTTGTTATTCGACAGACAAATA
TTATATGGATGCTTTTTGTTACCTGCTCTGGGGTCATTGATATTACACTG
GCGCATCAAAGAGATAGTGCAAAAGTATATAATTTAAAAGCAAATAAGGG
TATTAGTCCGTCAACCCTCATTACCAGTGTCAATGTGAGTTCAAACTTGA
GGAAAAGGAAGTCCAGGGGAAATTCAGAGGCTAATAAGCATTCCTTTTAC
AGGACAAACACCTCTTCAACATCCCAAACATCGGGTCTGCTTTATGAGAT
TCAGGCTATTGTTTTCACTGCATGGCGCATAAAGTGGGAGCTTTTGGTGT
CCTTTAGCCCATTCTTTTTTGTATTGCTGGCATTTGTTGGTTTTCTCATT
TGTAATGGGAGTGTTGTTTTAGGTGCAAAAGAAGCTCACACAGTTTCTCC
ACATTTTGCACAAATAATGTATTTTAGCATTGTTTCTGCTCTTTTTGCGG
CTCCTCTGCATTTCACAATAGGTCAAGCTCTAGATCTGTTTTGGTCATTC
TGGAAGAACAGGCTGCTTGGTTTTTTCCTAGGATTCTTGGCTTTGATGGC
TAGCCTCCTTTCTGTACATTTTTTCAGCATTGCTCACCCTTATCTACTTG
CTGACAATCGGCATTATACCTTCTATCTTTGGAGGAAGATAATCAATTTT
CATTGGTCAATGAAGTATCTTCTGGTGCCAGTTTATGTTTATTCATGGTT
CTCAATATTCCATCTATTGGATAAAACTCAAAGGAGAATCTGGGTATTGG
TGTATTTCTTGGCTACTTCTGCTGTTCTTGTTCCTGCTCCACTAATTGAG
TTCAGATACTATACGATACCATTCTATTTTTATATGCTTCATACTGGTAT
TAATGACTGCCAAAGCTTGCTTCTGATGGGGATTCTATATACAGTGCTTA
ATGTCTTCACAATGAGAATGTTCTTGTTTCGGCCATTCCATTGGGACCAT
GAGCCTGGGGTCCAGAGGTTCATATGGTAG
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protein sequence of Tc05v2_p003510.1

>Tc05v2_p003510.1 ID=Tc05v2_p003510.1|Name=Tc05v2_p003510.1|organism=Theobroma cacao|type=polypeptide|length=510bp
MGRIAVAAIVSVWVIPISILVNRIVPDPYMDEIFHIPQAQQYCNGNFRSW
DPMITTPPGLYYLSLVHVAALFPGNYFLQLASSFPEVCSTAALRSLNGVL
AVLCSILVYEIITHLRPALDDRKATLFAAVLALYPLHWFFTFFYYTDVAS
LTAVLAMYLACLKKKYLFSALLGAMAVVIRQTNIIWMLFVTCSGVIDITL
AHQRDSAKVYNLKANKGISPSTLITSVNVSSNLRKRKSRGNSEANKHSFY
RTNTSSTSQTSGLLYEIQAIVFTAWRIKWELLVSFSPFFFVLLAFVGFLI
CNGSVVLGAKEAHTVSPHFAQIMYFSIVSALFAAPLHFTIGQALDLFWSF
WKNRLLGFFLGFLALMASLLSVHFFSIAHPYLLADNRHYTFYLWRKIINF
HWSMKYLLVPVYVYSWFSIFHLLDKTQRRIWVLVYFLATSAVLVPAPLIE
FRYYTIPFYFYMLHTGINDCQSLLLMGILYTVLNVFTMRMFLFRPFHWDH
EPGVQRFIW*
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