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Properties
Property Name | Value |
Model evidence | Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns |
Product | serine/threonine-protein kinase ATG1c, transcript variant X2 |
Note | Serine/threonine-protein kinase ATG1c |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Tc05v2_t002700.3 ID=Tc05v2_t002700.3|Name=Tc05v2_t002700.3|organism=Theobroma cacao|type=mRNA|length=2178bp ATGGCGCAAGCGACGGGGAGGGAAAGAGTGGTAGGGAACTATATAGTAGG CCGGCAAATCGGTTCGGGTTCGTTCTCGGTTGTTTGGCATGCGAGGCACC GAGTTCATGGAACCGAAGTGGCGATAAAGGAGATCGCAATGGGTCGACTC AATAAGAAGTTGCAGGATAGTTTGATGTCGGAGATCTTTATTTTGAGGAG AATTAATCATCCTAATATTATTCGCATGCATGATATTATAGAGGTTCCTG GAAAGATACATCTTGTATTGGAGTACTGCAAGGGGGGCGATCTTTCTATG TATATTACACGCCATGGAAGTGTCTCTGAGGCAACTGCAAAGCATTTCAT GCAGCAGCTAGCGGCTGGCCTACAAGTTCTCCGTGACAATAATCTTATAC ATCGGGATCTAAAGCCTCAGAATCTTCTATTATCAAGAAATGATAGCAAT GCAGTTTTAAAGATTGCTGACTTTGGATTTGCAAGATCTCTGCAACCTAG GGGGCTTGCTGAAACATTGTGTGGTTCACCGCTATACATGGCTCCAGAGA TAATGCAGCTGCAGAAGTATGATGCAAAGGCAGATCTCTGGAGTGTCGGT GCTATTTTATTTCAGCTCGTTACTGGGAAAACTCCATTCACTGGAAACAA TCAAATACAGTTACTCCAGAACATTGTGAAATCAACCGAATTGCATTTTC CTGTGGAGAACAATTATTTGACTGCTGATTGCAAAGATTTATGTCGAAAA TTGCTTCGACGTAATCCAGTGGAACGTTTAACATTTGAAGAGTTCTTTAA CCACCCATTTCTTTCTCAGGGCCAACCAGATGAGTCATTGAGGAGTCAGA GATTTTCAAGAACAGTGGCTGGTTATCCTCTGTCTGAAAGCAATCCTGTA AGGAATACTGAGGACAGCTTTCAGGAGGACTGTCTCCCTTTCTTTCTGGA TGATGATTCTAGTGGTCCTGAAGGGAGCCCTTCCTCTGCAATGAAGAGGT CCTCAATGAAATTTGCTTATGGATTTTCTCCTGATGCAAAAGATGCTAGT GAAGTAACATCTAATCCTTTGAATAAAGTGGGTTTTACTTCCAAATACAG TGGTACAAGACATAAACCAGAAAATACTAGTTTTAGGCTTGAAAGTCGCA AGGTTCCAGGTGAAACTCTGCATGAACCTCAGAAATCCATGGATCAAAGA TATGTGAATACTGGTTCAAGAGTTGGTGACTCACTGGAGTTGATCGACCA AGATTATGTTCTTGTGTCTGGACCTCCCATGGATGTGTCATGTTCTTCAG CTAGCACTTCCAAGCCAAACAATATCCCATACAAATCAGAGAGTCCACCT TTAATCCCCTTTACAAATAACAGCACATCAACTGCCCCTGTGCCTATTGT TGATGCCACCAACATTAACATCTGTACTGTAGGAAGCTTGGAAAGTCAGA GCTCTGCCCCTGGGACTTCTCAAGGATCAATGGATATGGGAGATGTTCTG GAACAGCCATCATCTCATTGCATGACGAGGATAAAGTCATTACAGCAGTG TGCATCTGCTATTACTGAATTAGTGCATGAAAATATTGAGGCAGGTAGAC AACTTGAAGCATTCTCAATCCAGCTTGTGATTCTTGCGATTTGGAAGCAA GCATTGCATATTTGCCATGCACAGGCTGCATCAGCAATGGAAGGAAGTCC AAGCCAAGAAACGAGCAGATTGAGGAGTGGCAGCAAGAAGCATGGAACAT CTGATACAGAAGAATGTCAGGATATTTTCAGCCCTGAAGGGCCAGAGGAT ATATCCGTAGAGATAGAGAGGGAATTTCTCCAGGAAGTTGAACATGCTGA GGAACTTGCCAAGGTTATTGAGCCTGGAAGAACAGAGATGCCTGATGCAA TGGAGACAATATTTCAAGCTGCCCTTGCTTTGGGAAGGCATGGAGGGGTT GATGAGCTTATGGGTAAAATGGAAAGGGCAGCTTTGTTGTATTCAAAGGC AGTGCGATTATTAGTATTTCTTCTAGTCGAAGCACCGTCCCTCATTCTCA ATCCTCCATTTTCTCTCACAAACTCAGATCGGTATAGACTTCAAACTTAC ATTGATGTTCTTAGAAACAGGCAAGGTTATTCAAGATCCCAGAGGATGGC TCTTCTCAAGTGCAAGGAACAGCCATAG back to topprotein sequence of Tc05v2_p002700.3 >Tc05v2_p002700.3 ID=Tc05v2_p002700.3|Name=Tc05v2_p002700.3|organism=Theobroma cacao|type=polypeptide|length=726bp
MAQATGRERVVGNYIVGRQIGSGSFSVVWHARHRVHGTEVAIKEIAMGRL NKKLQDSLMSEIFILRRINHPNIIRMHDIIEVPGKIHLVLEYCKGGDLSM YITRHGSVSEATAKHFMQQLAAGLQVLRDNNLIHRDLKPQNLLLSRNDSN AVLKIADFGFARSLQPRGLAETLCGSPLYMAPEIMQLQKYDAKADLWSVG AILFQLVTGKTPFTGNNQIQLLQNIVKSTELHFPVENNYLTADCKDLCRK LLRRNPVERLTFEEFFNHPFLSQGQPDESLRSQRFSRTVAGYPLSESNPV RNTEDSFQEDCLPFFLDDDSSGPEGSPSSAMKRSSMKFAYGFSPDAKDAS EVTSNPLNKVGFTSKYSGTRHKPENTSFRLESRKVPGETLHEPQKSMDQR YVNTGSRVGDSLELIDQDYVLVSGPPMDVSCSSASTSKPNNIPYKSESPP LIPFTNNSTSTAPVPIVDATNINICTVGSLESQSSAPGTSQGSMDMGDVL EQPSSHCMTRIKSLQQCASAITELVHENIEAGRQLEAFSIQLVILAIWKQ ALHICHAQAASAMEGSPSQETSRLRSGSKKHGTSDTEECQDIFSPEGPED ISVEIEREFLQEVEHAEELAKVIEPGRTEMPDAMETIFQAALALGRHGGV DELMGKMERAALLYSKAVRLLVFLLVEAPSLILNPPFSLTNSDRYRLQTY IDVLRNRQGYSRSQRMALLKCKEQP* back to top
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