Tc05v2_t001930.1

Overview
NameTc05v2_t001930.1
Unique NameTc05v2_t001930.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length786
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 4 ESTs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
Productsteroid 5-alpha-reductase DET2
NoteSteroid 5-alpha-reductase DET2
Cross References
External references for this mRNA
DatabaseAccession
GeneID18597607
GenbankXM_007026741.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc05v2_g001930Tc05v2_g001930Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc05v2_p001930.1Tc05v2_p001930.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto257354auto257354Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto257355auto257355Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc05v2_t001930.1 ID=Tc05v2_t001930.1|Name=Tc05v2_t001930.1|organism=Theobroma cacao|type=mRNA|length=786bp
ATGCCCAGAGACTCAGATCAGCCCCTTTTTCACTACAGCCTCCTCGGTCT
CTACCTCATCGTCCTACCGACATGGATCAGCCTCAAGTTCATTCAGGCCC
CTTACGGCAAGCACAACCGCCCTGGATGGGGGCCAACCCTGTCTCCATCT
TTGGCTTGGTTCCTCATGGAAAGCCCCACCCTTTGGCTCACTGTCTTGCT
CTTTCCTTTCGGCCGACACTTTTCCAACCCGAAATCGTTCATTCTGATGT
CTCCTTATCTCTTCCACTATTTCAACCGTACAGTGCTTTACCCTCTTCGC
CTGTCACGCAGCAGCAACGGCCAAGCCAGGAGTTTTCCGGTGAGTATAGC
TCTCATGGCTTTCGGGTTTAATCTCTTGAATGCTTATCTGCAAGCCAGGT
GGGTGTCTCACTACAAGGATGATTATGAAAACGACAAGCTGTTTTGGCTG
AGATTCCTTGTCGGATTGCTGGTTTTTATTGCTGGCATGTGGGTGAATGT
TTGGGCTGATAGCGTCCTGGTGGGGCTTAAAAAGCAGGGTGGTGGCGGAT
ACAAGGTTCCAAGAGGGGGGTTGTTCGACTTGGTGAGCTGCCCTAACTAC
TTTGGGGAGATCATGGAGTGGTTGGGCTGGGCGGTGATGACATGGTCCTG
CGTGGGGTTTGGGTTCTTTCTCTACACCTGTGCCAACCTGGTGCCTAGAG
CTCGTGCCAGCCGCCGCTGGTATTTGGAGAAGTTCAAGGACGATTACCCC
AAGCACAGAAAAGCTGTGATCCCATTTCTCTATTGA
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protein sequence of Tc05v2_p001930.1

>Tc05v2_p001930.1 ID=Tc05v2_p001930.1|Name=Tc05v2_p001930.1|organism=Theobroma cacao|type=polypeptide|length=262bp
MPRDSDQPLFHYSLLGLYLIVLPTWISLKFIQAPYGKHNRPGWGPTLSPS
LAWFLMESPTLWLTVLLFPFGRHFSNPKSFILMSPYLFHYFNRTVLYPLR
LSRSSNGQARSFPVSIALMAFGFNLLNAYLQARWVSHYKDDYENDKLFWL
RFLVGLLVFIAGMWVNVWADSVLVGLKKQGGGGYKVPRGGLFDLVSCPNY
FGEIMEWLGWAVMTWSCVGFGFFLYTCANLVPRARASRRWYLEKFKDDYP
KHRKAVIPFLY*
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