|
Properties
Property Name | Value |
Model evidence | Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns |
Product | protein BREAST CANCER SUSCEPTIBILITY 2 homolog B, transcript variant X1 |
Note | Protein BREAST CANCER SUSCEPTIBILITY 2 homolog B |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Tc05v2_t000620.2 ID=Tc05v2_t000620.2|Name=Tc05v2_t000620.2|organism=Theobroma cacao|type=mRNA|length=3324bp ATGTCGACGTGGCAGATATTCTCTGACGCCGGAAACGATTTCCGGTGGGA GGTTTCCGGTCGTATCCTCCCGTCTAAACCAGACGATGAGCCGAACCGCG CTCCTGTTCCTCCACTCCCTTCCATGGCCGATCTCCTGCTTCAAGGATGC TCGAAGCTTATTGAGAACGGAGATGCAGGAGTCGGGAAATGTCCGATGTT TAGAACCGGATTAGGTAAATCGGTGGCTTTGAAAGAGTCTTCCATTGCAA AAGCATTGTCTATTCTTGGCGACGATGACGTTGGCACTGCTGTTACTTCA AGCGAAGTGGTTCCCGGAAACAATGGATTCGGCTGCACTAACTCTCTTTT TCAAACGGGCTCTGGGAAAATGGTTAACATATCTTCAGCTGGTTTGGTCA GAGCTAAGACATTGCTGGGACTGGAACAAGATAATGAGCATCACAGTTTT GAAGGTTTTCAACATCCAAAGAAGTTACGTGCAACTAATGAACCTTGTGG GTGGCAAAGTTTTTCTCATTCAGAGAAAAAAGAAGGTTTACGAAATACTG GGGTTGCGGATTTTTTTTCAGAATCAAGGCACTTGTTAAACTCTAGGAAT GGTTTTGTAGGAAGTACAGTAGGCAGTGAAAATGACTCAACGCCAGTGCA TTCCAAAGAGTTTGATTCAGCTCCCAAGCCACCTCCAATCAAGTTTCATA CTGCTGGTGGAAGGTCGTTATCAGTTTCAAGTGATGCATTGAAGCGTGCA AGGAGTCTTCTTGGTGATCCAGAGCTAGGGAATTTCTTTGGTGAAGTAGA AGAAGAGGTTCCACCGTTTACTGTTTCAGAGGAAAAGTTTAATGATGCTT CATCAAACAAGGAAAACCATTTTTTCACTTCCTTTTCCCTTCAAGGAACA ATAAAGAGTAAAGATACATCCAAGGATTTTATATCTCCACTGAAAGCATC TTTCAAGCAAATGAGGTCCATATTTAATTCAGAAAAAATATGTTGTGGGA GTAACTTGATTGACAAATTTGATGCAGTTGGAAATTCTAATGCATGTATG TCGACCACCAATATGCCTTCTGCTCAGAAGCCTTTAAGCAATAGTACTTC TGAGAAAAATTTGGTAACGAACATTTCGTTGCCAAGGCTTGGAAAGTCAT TTGGCGGCCCATTGGCTGATATTTCAAATAACATTGTCACATCTCAAACA AATAACAAACGGATTATGACTGAAAAGAAGCGAATTGGAAGATCAAGTTT TATTTCTCCATACAAGAGACCCCGCTGTTCTGAATTCTCTACTCCATTGA ATAAAGGTGTTTCCTTTGTAGGTAATGATGATCATTCATGTTGCAAAAGA ACAGTTTCCACTAAATATCCATTTCAAGTGCCAAGAGTATATATGAAGGA ATATTTTGCAGTGCCTCCATCAGCCTGCAGCATGTTGGAGTGTTTGTCAG ACCAAGAGAAACAGATCAAACCAGACAATGCAGTTAAGTATATGTTTAAA GATGAATCTGGCTTAAGTCGCATTGGGGCAGAAGCTTTTTATGACATGTT GGCTCATTCTGGAGCTTCTATGCAATACATTTCTAAAGAGTGGGTTGCAA ATCACTATAAGTGGATTGTCTGGAAACTTGTGTGTTATGAGAGGTGCTAT CCTTCAAAATGTGCTGGAAATTTTTTGACTATCTCCAATGTCCTCGAGGA ACTAAAGTACAGATACGATAGGGAAGTAAATCATGCACACCGTTCTGCAA TAAAAAGAATACTTGAAGGGGATGCTTCGCCTTCTACAATGTTGGTACTA TGCATTTCAAATATTCAGTCAAATTCTGAACCAAAGATGGAGACAAATCT ATTGATTACAAATGGAGCTGATAATAGCGGTAATGCAAAAGTGGAACTAA CAGATGGGTGGTATTCAATGGATGCTGTTTTGGATGTATTGCTATCAAAA CAGCTTGCTGCTGGAAAGTTATTTGTGGGACAGAAACTTCGGATCTGGGG AGCAGGATTGTGTGGCTGGGTTGGGCCTGTTTCACCCCTTGAGGCATCAA GTGCAATAAGTTTACTTTTGAACATAAATGGGACATTTAGAGCTCATTGG GCTGATCGGCTGGGATTTTGCAAGGGTGTTGGTACTCCTTTGGCATTTAG GTGCATCAAAAGTGATGGAGGTCCAGTGCCTTGGACTTTAGTAGGAGTCA CTCGGATATACCCTGTTCTCTACAGGGAGAGGTTGAGTAATGGGGGGTCA ATTGTCAGATCCGAAAGGATGGAGAGTAGAATGGTTCAACAGCACAACCA AAGGGGCTCGGTTGTTGTAGATCACGTTATATCTGAGTATCAAAGAGGGG TCAACAGTTCTCATATCCTTAGTGACAGTGAGAGTGAAGGAGCAAAAATC TTGAAAATTCTTGAGACAGCTGCTGAGCCAGAAGTCTTAATGGCAGAAAT GAGCCCAGAGCAACTAACTTCCTTTGCTACATATAAATCAAAACTTGAGG CAACCAGGCAGTTAGAGATGGAGAAATCAATCAAGAAAGCTCTGGCAGAA GCTGGCTTAAATGAGCGAGATGTTGTCCCATTCATAAGGGTGAGAGTTGT TGGATTAACCACTAGGAAATATCATGGAAAGGGAAGACCTAAAGAAGGCA TAATAACCATTTGGAATCCTACAGAAAAGCAGAAAAGCGAGCTGGTTGAG GGGCAGGCATACGTCGTTGCTGGGCTTATACCAATATACTCAGATTCAGA AGCCCTTTATTTACAAGCCCGTGGATCTACCACTAAATGGCAGCCTTTAT CTCCCATGGCAATGGAATGCTTTGAGCCATTTTTCAGTCCGCGAAAGCCA ACGAAATTGTCAAATTTAGGTGAAATTCCTCTTTCCAGTGAGTTTGACAT TGCTGTATATGTTGTGTACGTGGGGGAAGTCTATACGGCTGCTCATCAAA AGAAACAGTGGGTGTTTGTGACAGATGATTCCATTTCAAATTTACTGTCA GAAGGATTATCAGATTCTTTACTTGCCATCAGCTTTTGCTCACCATGCAT TGATAAGGACTCATTTGCTCCAATCAACTCTAACCTAGTGGGATCCATGG TAGGGTTCTGTAACCTTATCAAGAAAGCAAAGGATCAAATGAATCATCTC TGGGTTGCCGAAGCAGCAGAAAATTGTGCATACTTTTTAAATTTGAATCC CTCAATTTGTTCTCACCTTAAAATTGCTGGTGCCTCAGTTCAGACATGGG CAAAGGCCTCTAACTCGATTATTGACAAACTCAGGGAGAAGGTTTTATTT ATTCTTGACAATTGTGGAGGCTAA back to topprotein sequence of Tc05v2_p000620.2 >Tc05v2_p000620.2 ID=Tc05v2_p000620.2|Name=Tc05v2_p000620.2|organism=Theobroma cacao|type=polypeptide|length=1108bp
MSTWQIFSDAGNDFRWEVSGRILPSKPDDEPNRAPVPPLPSMADLLLQGC SKLIENGDAGVGKCPMFRTGLGKSVALKESSIAKALSILGDDDVGTAVTS SEVVPGNNGFGCTNSLFQTGSGKMVNISSAGLVRAKTLLGLEQDNEHHSF EGFQHPKKLRATNEPCGWQSFSHSEKKEGLRNTGVADFFSESRHLLNSRN GFVGSTVGSENDSTPVHSKEFDSAPKPPPIKFHTAGGRSLSVSSDALKRA RSLLGDPELGNFFGEVEEEVPPFTVSEEKFNDASSNKENHFFTSFSLQGT IKSKDTSKDFISPLKASFKQMRSIFNSEKICCGSNLIDKFDAVGNSNACM STTNMPSAQKPLSNSTSEKNLVTNISLPRLGKSFGGPLADISNNIVTSQT NNKRIMTEKKRIGRSSFISPYKRPRCSEFSTPLNKGVSFVGNDDHSCCKR TVSTKYPFQVPRVYMKEYFAVPPSACSMLECLSDQEKQIKPDNAVKYMFK DESGLSRIGAEAFYDMLAHSGASMQYISKEWVANHYKWIVWKLVCYERCY PSKCAGNFLTISNVLEELKYRYDREVNHAHRSAIKRILEGDASPSTMLVL CISNIQSNSEPKMETNLLITNGADNSGNAKVELTDGWYSMDAVLDVLLSK QLAAGKLFVGQKLRIWGAGLCGWVGPVSPLEASSAISLLLNINGTFRAHW ADRLGFCKGVGTPLAFRCIKSDGGPVPWTLVGVTRIYPVLYRERLSNGGS IVRSERMESRMVQQHNQRGSVVVDHVISEYQRGVNSSHILSDSESEGAKI LKILETAAEPEVLMAEMSPEQLTSFATYKSKLEATRQLEMEKSIKKALAE AGLNERDVVPFIRVRVVGLTTRKYHGKGRPKEGIITIWNPTEKQKSELVE GQAYVVAGLIPIYSDSEALYLQARGSTTKWQPLSPMAMECFEPFFSPRKP TKLSNLGEIPLSSEFDIAVYVVYVGEVYTAAHQKKQWVFVTDDSISNLLS EGLSDSLLAISFCSPCIDKDSFAPINSNLVGSMVGFCNLIKKAKDQMNHL WVAEAAENCAYFLNLNPSICSHLKIAGASVQTWAKASNSIIDKLREKVLF ILDNCGG* back to top
|