Tc04v2_t022200.1

Overview
NameTc04v2_t022200.1
Unique NameTc04v2_t022200.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1035
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
ProductS-adenosylmethionine decarboxylase proenzyme 4
NoteS-adenosylmethionine decarboxylase proenzyme 4
Cross References
External references for this mRNA
DatabaseAccession
GeneID18603379
GenbankXM_007035307.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc04v2_g022200Tc04v2_g022200Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc04v2_p022200.1Tc04v2_p022200.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto244393auto244393Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto244394auto244394Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc04v2_t022200.1 ID=Tc04v2_t022200.1|Name=Tc04v2_t022200.1|organism=Theobroma cacao|type=mRNA|length=1035bp
ATGGCTGTTTCAGGGTTTGAAGGCTTTGAGAAGCGCCTAGAGCTCCATTT
CTTTGGGGATGATCCGGTGAATATTGACATGGGGCTTAGGCTGCTCGACT
TGGAATCACTGGAGCAAGTTCTACATGCTGTCCAATGCACTGTTGTTTCA
GCCGTCGGGAACCATTTCTTTGATGCTTACGTGTTATCGGAATCCAGTCT
CTTCGTTTACCCTACCAAGATCATCATCAAAACCTGCGGGACCACCCAAC
TGCTCAAATCCATCCGTCCATTAATCCACTATGCGAACAAGCTTGGCCTG
ACTTTGTGCGGGTGTAGGTACACCAGAGGCAGCTTCATTTTCCCCAAGTC
ACAACCTTTCCCTCACACCAACTTCAAGGAAGAAGTCATTTACATCGAAG
AAAACCTGCCCAACAGTCTCTGCTATAGGAAAGCTTCTGTCATGCCTTCC
AAACTCCCTTCTTATTCATGGCACGTTTTCACAGCCAGTGGCCAAACCCA
CATGCCACGCTACGCCTTGAAAGCCCCCGACGTCACCTTCACTGTCGAAG
TATGCATGACGGAACTCGACCGCCTCCTCGCACGTAAATTCTTCAAGCGG
GCAGGGGATAGCAAAACAGGGGACTCGGCTGGCAAGGAAATGACAGAGCT
AACAGGTATCGACAACATCAACCCTGGCGCCATCATTTGCGACTTCGCAT
TCGACCCCTGCGGCTACTCCATGAACGGCATTGACGGTGACCGTTACTCC
ACAATCCACGTCACCCCTGAAGACGGCTACAGCTACGCTAGCTTCGAGTG
CGTCGGGTCCATTTACGACGACCAAGACATTGTCGAAACCCTGAAGAAGG
CTGTTCAAGTTTTCAGGCCAGCCACACTCTCCATCTCAACAACATGCAAT
AGCCACGAAGTTTGGACAAGGGTGGCACATGCCATGGAACCCCTAGGACT
CAAATGCCGGAGTTGTGCAATGGATGAGTTCCCCGCCGCCGGTAGCATTG
TGTTCCAAACATTCACGGCGTGTCGCCGGAAATAA
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protein sequence of Tc04v2_p022200.1

>Tc04v2_p022200.1 ID=Tc04v2_p022200.1|Name=Tc04v2_p022200.1|organism=Theobroma cacao|type=polypeptide|length=345bp
MAVSGFEGFEKRLELHFFGDDPVNIDMGLRLLDLESLEQVLHAVQCTVVS
AVGNHFFDAYVLSESSLFVYPTKIIIKTCGTTQLLKSIRPLIHYANKLGL
TLCGCRYTRGSFIFPKSQPFPHTNFKEEVIYIEENLPNSLCYRKASVMPS
KLPSYSWHVFTASGQTHMPRYALKAPDVTFTVEVCMTELDRLLARKFFKR
AGDSKTGDSAGKEMTELTGIDNINPGAIICDFAFDPCGYSMNGIDGDRYS
TIHVTPEDGYSYASFECVGSIYDDQDIVETLKKAVQVFRPATLSISTTCN
SHEVWTRVAHAMEPLGLKCRSCAMDEFPAAGSIVFQTFTACRRK*
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