|
Properties
Property Name | Value |
Model evidence | Supporting evidence includes similarity to: 2 ESTs, 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns |
Product | 3-isopropylmalate dehydratase large subunit, transcript variant X1 |
Note | 3-isopropylmalate dehydratase large subunit |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Tc04v2_t021680.1 ID=Tc04v2_t021680.1|Name=Tc04v2_t021680.1|organism=Theobroma cacao|type=mRNA|length=1530bp ATGGCATCTTCGGTGGGTTTTCCACACCCAATGTTTTGCTTGTTCAATAA CAAGAAAGATTTGAGCCCCTCTGCCTTCGCTTCAACATCACAAACCATTT ACAAATGCAAGAAACCAGTTTCCAAGAATATTGGGATGGTCATGGCACCA CAACAATCAGAGCACAAACCTGCCACCACAGGCTCAGTCAAGTCTCCAAT GACTATGACAGAAAAGATTCTTGCTAGGGCCTCTGAGAAGCCCCAGCTGA GACCAGGTGACAACGTTTGGGTTAACGTTGATGTATTCATGACTAATGAT ATTAGTGGTCCTGGTTCCATTGGTATCTTCAAGAAAGAATTTGGTGAAGA TGCTAAGCTTTGGGACCGTGAAAAGATTGTTGTTATACCTGACCATTATA TATTCACAAGTGATGAACGTGCAAATCGTAATGTGGATATCTTGAGGGAG TTTTCCATGGAGCAAAATATCAAGTACTTTTATGATATTAAAGATCTTAG TAATTTTAAGGCTAACCCCAACTACAAAGGAGTATGCCATGTTGCACTTG CTCAAGAAGGTCATTGTAGACCTGGAGAGGTTTTGTTAGGGACAGATTCT CATACCTGTACTGCTGGAGCATTTGGTCAGTTTGCTACAGGAATTGGAAA TACTGAAGCAGGTTTTGTATTAGGCACCGGGAAGCTTTTGCTCAAGGTAC CACAAACTTTGAGGTTTGTGATGGATGGTGAAATGCCTCATTATTTGCTT GCAAAGGATTTGATTTTGCAGATCATTGGTGAAATTTCTGTAGCCGGTGC AACATATAAATCCATGGAGTTCATTGGCACAACTGTTGAAAGTTTAAGTA TGGAAGAACGGATGACATTATGCAATATGGTTATTGAAGCTGGTGGAAAG AATGGTGTTGTTTCTACTGATAGTACTACATTTAAGTACCTTGAGGATAA AACATCTGTGCCATACGAACCACTTTATAGTGATGCACAAGCAAGTTTTC TTTCAGAGTTCAGATTTGCTGTCTCAAAGTTGGAGCCCTTGGTAGCTAAG CCTCATTCTCCTGATAATCGTGCTTTGGCAAGAGAGTGCAAAGATATTAA AATTGACAGAGTCTATATTGGATCTTGTACTGGTGGCAAAACAGAAGATT TTCTTGCTGCTGCCAAAGTCTTTTTAGCCTCAGGCAGAAAGGTCAAAGTC CCCACATTCCTTGTTCCTGCTACCCAAAAGGTTTGGATGGACATATATAC TGTCACTGTACCAGGATCTGGTGGCAAGACTTGCTCCCAGATTTTCGAAG AAGCTGGCTGTGATACACCTGCAAGCCCTAGTTGTGCTGCTTGTATGGGT GGCCCTAAAGACACATATGCACGCATGAATGAAGCTCAGGTCTGTGTCTC AACAACAAATAGAAACTTCCCTGGTCGGATGGGACATAAGGAAGGCCAGA TATATCTTGCTTCCCCATACACAGCAGCTGCCTCTGCTTTGACTGGTTAT ATCACTGATCCAAGGGAGTTTTTGCAGTAG back to topprotein sequence of Tc04v2_p021680.1 >Tc04v2_p021680.1 ID=Tc04v2_p021680.1|Name=Tc04v2_p021680.1|organism=Theobroma cacao|type=polypeptide|length=510bp
MASSVGFPHPMFCLFNNKKDLSPSAFASTSQTIYKCKKPVSKNIGMVMAP QQSEHKPATTGSVKSPMTMTEKILARASEKPQLRPGDNVWVNVDVFMTND ISGPGSIGIFKKEFGEDAKLWDREKIVVIPDHYIFTSDERANRNVDILRE FSMEQNIKYFYDIKDLSNFKANPNYKGVCHVALAQEGHCRPGEVLLGTDS HTCTAGAFGQFATGIGNTEAGFVLGTGKLLLKVPQTLRFVMDGEMPHYLL AKDLILQIIGEISVAGATYKSMEFIGTTVESLSMEERMTLCNMVIEAGGK NGVVSTDSTTFKYLEDKTSVPYEPLYSDAQASFLSEFRFAVSKLEPLVAK PHSPDNRALARECKDIKIDRVYIGSCTGGKTEDFLAAAKVFLASGRKVKV PTFLVPATQKVWMDIYTVTVPGSGGKTCSQIFEEAGCDTPASPSCAACMG GPKDTYARMNEAQVCVSTTNRNFPGRMGHKEGQIYLASPYTAAASALTGY ITDPREFLQ* back to top
|