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Properties
Property Name | Value |
Model evidence | Supporting evidence includes similarity to: 7 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns |
Product | pre-mRNA-processing factor 19 homolog 1, transcript variant X2 |
Note | Pre-mRNA-processing factor 19 homolog 1 |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Tc04v2_t021500.2 ID=Tc04v2_t021500.2|Name=Tc04v2_t021500.2|organism=Theobroma cacao|type=mRNA|length=1566bp ATGAACTGTTCAATCTCCGGCGAGGTGCCGGAAGAGCCCGTCGTCTCCAA GAAATCCGGCTTGCTTTACGAGAAACGCTTAATCGAACGACACATTTCGG ATTATGGGAAGTGTCCGGTTACAGGGGAACCGCTTACAATGGACGACATT GTCCCGGTCAAAGCCGGCAAGATTGTAAAGCCCAGATCGTTAACAGCGGC TAGCATTCCTGGGATGCTTGGAATGTTTCAGAATGAATGGGATGCTTTAA TGCTATCCAATTTTGCACTGGAGCAGCAGCTACATGCAGCAAGGCAAGAG CTAAGTCATGCACTCTACCAGCATGATGCTGCCTGCCGTGTGATTGCAAG ACTTAAAAAGGAAAGGGATGAAGCCAGGTCATTACTTGCACAGGCTGAAA GGCAGGCACCCTTGCCAGCATCGGCAGTTACTGCCAATGTTTCTGCTCTT ACCAATGGAAAGCGAGAGGATGTAGATATGGGGCCTGGGGCAAAGAGAAT GCGTCCTGGGATTTCTGATAGTATTATTGCTGAGTTAACAGAATGTAACG CAGCTCTGTCACAACAGCGTAAAAAGCGCCAGATACCTCCGACATTGGCT CCCATTGATGCTTTGGAGAGGTATACACAACTTTCTAGTCATCCCCTTCA CAAGACAAACAAACCAGGGATCACTTCAATTGATATCAATCTTTCAAAGG ATATTGTTGCCACAGGAGGAATTGATTCAAGTGCTGTACTCTTTGATCGA ACATCTGGAGAGATCTTATCAACGCTTAGTGGTCACTCGAAGAAGGTTAC AAGTGTAAAATTTGTAGCTCAGAACGATGTTTTTTTAAGTGGATCAGCAG ATAAGACTGTTCGCATTTGGCAAGGGTCTGAAGATGGAAAGTACGATTGC AGGCATATTTTGAAGGATCATACAGCTGAGGTGCAAGCTGTCACAGTCCA TGCCACAAATAACTACTTCGTAACTGCTTCCCTTGACACAACATGGTGCT TTTATGATCTTTCCTCTGGCATATGCTTGACACAGGTTGAAGACCCTTCA AATTCCATGGGCTATACATCTGCTGCGTTTCATCCAGATGGTCTCATCCT TGGGACAGGCACCACCGAAGCTACTGTTAGAATTTGGGATGTGAAGAGTC GGGGAAATGTTGCCAACTTTGATGGTCACACTGGGGCAGTAACAGCCATA TCTTTCTCAGAAAATGGTTACTTCCTTGCAACTGCTGCACATGATGGTGT TAAGTTGTGGGATCTGCGCAAATTGAAGAACTTCCGATCATTTGAATTAT ATGATCAAGACACACCAACTAACTCTGTGGATTTCGACCATAGTGGAACT TACCTTGCAATTGCAGGCTCAGATATAAGAGTTTACCAAGTTGGCAGCGT CAAAGCAGACTGGACTTGCATCAAAACTTTACCTGATTTGTCTGGCACAG GTAGAGCAACTTGTGTAAAATTTGGTCCAGATGCAAGGTACTTGGCGGTG GGATCAATGGATCGCAACCTCCGCATATTCGGCCTTCCTGAAGATGATGC TTCAGCTGAGTCATAA back to topprotein sequence of Tc04v2_p021500.2 >Tc04v2_p021500.2 ID=Tc04v2_p021500.2|Name=Tc04v2_p021500.2|organism=Theobroma cacao|type=polypeptide|length=522bp
MNCSISGEVPEEPVVSKKSGLLYEKRLIERHISDYGKCPVTGEPLTMDDI VPVKAGKIVKPRSLTAASIPGMLGMFQNEWDALMLSNFALEQQLHAARQE LSHALYQHDAACRVIARLKKERDEARSLLAQAERQAPLPASAVTANVSAL TNGKREDVDMGPGAKRMRPGISDSIIAELTECNAALSQQRKKRQIPPTLA PIDALERYTQLSSHPLHKTNKPGITSIDINLSKDIVATGGIDSSAVLFDR TSGEILSTLSGHSKKVTSVKFVAQNDVFLSGSADKTVRIWQGSEDGKYDC RHILKDHTAEVQAVTVHATNNYFVTASLDTTWCFYDLSSGICLTQVEDPS NSMGYTSAAFHPDGLILGTGTTEATVRIWDVKSRGNVANFDGHTGAVTAI SFSENGYFLATAAHDGVKLWDLRKLKNFRSFELYDQDTPTNSVDFDHSGT YLAIAGSDIRVYQVGSVKADWTCIKTLPDLSGTGRATCVKFGPDARYLAV GSMDRNLRIFGLPEDDASAES* back to top
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