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Properties
Property Name | Value |
Model evidence | Supporting evidence includes similarity to: 7 ESTs, 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns |
Product | pre-mRNA-processing factor 19 homolog 1, transcript variant X1 |
Note | Pre-mRNA-processing factor 19 homolog 1 |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Tc04v2_t021500.1 ID=Tc04v2_t021500.1|Name=Tc04v2_t021500.1|organism=Theobroma cacao|type=mRNA|length=1572bp ATGAACTGTTCAATCTCCGGCGAGGTGCCGGAAGAGCCCGTCGTCTCCAA GAAATCCGGCTTGCTTTACGAGAAACGCTTAATCGAACGACACATTTCGG ATTATGGGAAGTGTCCGGTTACAGGGGAACCGCTTACAATGGACGACATT GTCCCGGTCAAAGCCGGCAAGATTGTAAAGCCCAGATCGTTAACAGCGGC TAGCATTCCTGGGATGCTTGGAATGTTTCAGAATGAATGGGATGCTTTAA TGCTATCCAATTTTGCACTGGAGCAGCAGCTACATGCAGCAAGGCAAGAG CTAAGTCATGCACTCTACCAGCATGATGCTGCCTGCCGTGTGATTGCAAG ACTTAAAAAGGAAAGGGATGAAGCCAGGTCATTACTTGCACAGGCTGAAA GGCAGGCACCCTTGCCAGCATCGGCAGTTACTGCCAATGTTTCTGCTCTT ACCAATGGAAAGCGAGCTGCAGAGGATGTAGATATGGGGCCTGGGGCAAA GAGAATGCGTCCTGGGATTTCTGATAGTATTATTGCTGAGTTAACAGAAT GTAACGCAGCTCTGTCACAACAGCGTAAAAAGCGCCAGATACCTCCGACA TTGGCTCCCATTGATGCTTTGGAGAGGTATACACAACTTTCTAGTCATCC CCTTCACAAGACAAACAAACCAGGGATCACTTCAATTGATATCAATCTTT CAAAGGATATTGTTGCCACAGGAGGAATTGATTCAAGTGCTGTACTCTTT GATCGAACATCTGGAGAGATCTTATCAACGCTTAGTGGTCACTCGAAGAA GGTTACAAGTGTAAAATTTGTAGCTCAGAACGATGTTTTTTTAAGTGGAT CAGCAGATAAGACTGTTCGCATTTGGCAAGGGTCTGAAGATGGAAAGTAC GATTGCAGGCATATTTTGAAGGATCATACAGCTGAGGTGCAAGCTGTCAC AGTCCATGCCACAAATAACTACTTCGTAACTGCTTCCCTTGACACAACAT GGTGCTTTTATGATCTTTCCTCTGGCATATGCTTGACACAGGTTGAAGAC CCTTCAAATTCCATGGGCTATACATCTGCTGCGTTTCATCCAGATGGTCT CATCCTTGGGACAGGCACCACCGAAGCTACTGTTAGAATTTGGGATGTGA AGAGTCGGGGAAATGTTGCCAACTTTGATGGTCACACTGGGGCAGTAACA GCCATATCTTTCTCAGAAAATGGTTACTTCCTTGCAACTGCTGCACATGA TGGTGTTAAGTTGTGGGATCTGCGCAAATTGAAGAACTTCCGATCATTTG AATTATATGATCAAGACACACCAACTAACTCTGTGGATTTCGACCATAGT GGAACTTACCTTGCAATTGCAGGCTCAGATATAAGAGTTTACCAAGTTGG CAGCGTCAAAGCAGACTGGACTTGCATCAAAACTTTACCTGATTTGTCTG GCACAGGTAGAGCAACTTGTGTAAAATTTGGTCCAGATGCAAGGTACTTG GCGGTGGGATCAATGGATCGCAACCTCCGCATATTCGGCCTTCCTGAAGA TGATGCTTCAGCTGAGTCATAA back to topprotein sequence of Tc04v2_p021500.1 >Tc04v2_p021500.1 ID=Tc04v2_p021500.1|Name=Tc04v2_p021500.1|organism=Theobroma cacao|type=polypeptide|length=524bp
MNCSISGEVPEEPVVSKKSGLLYEKRLIERHISDYGKCPVTGEPLTMDDI VPVKAGKIVKPRSLTAASIPGMLGMFQNEWDALMLSNFALEQQLHAARQE LSHALYQHDAACRVIARLKKERDEARSLLAQAERQAPLPASAVTANVSAL TNGKRAAEDVDMGPGAKRMRPGISDSIIAELTECNAALSQQRKKRQIPPT LAPIDALERYTQLSSHPLHKTNKPGITSIDINLSKDIVATGGIDSSAVLF DRTSGEILSTLSGHSKKVTSVKFVAQNDVFLSGSADKTVRIWQGSEDGKY DCRHILKDHTAEVQAVTVHATNNYFVTASLDTTWCFYDLSSGICLTQVED PSNSMGYTSAAFHPDGLILGTGTTEATVRIWDVKSRGNVANFDGHTGAVT AISFSENGYFLATAAHDGVKLWDLRKLKNFRSFELYDQDTPTNSVDFDHS GTYLAIAGSDIRVYQVGSVKADWTCIKTLPDLSGTGRATCVKFGPDARYL AVGSMDRNLRIFGLPEDDASAES* back to top
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