Tc04v2_t020880.1

Overview
NameTc04v2_t020880.1
Unique NameTc04v2_t020880.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length678
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 7 ESTs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
Productprobable glutathione S-transferase
NoteProbable glutathione S-transferase
Cross References
External references for this mRNA
DatabaseAccession
GeneID18603222
GenbankXM_018120148.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc04v2_g020880Tc04v2_g020880Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc04v2_p020880.1Tc04v2_p020880.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto240979auto240979Theobroma cacaoexon
exon-auto240980auto240980Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto240981auto240981Theobroma cacaoCDS
CDS-auto240982auto240982Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc04v2_t020880.1 ID=Tc04v2_t020880.1|Name=Tc04v2_t020880.1|organism=Theobroma cacao|type=mRNA|length=678bp
ATGGCAACCGAAGAGGTGAAGCTTTTGGGGTTCTGGGTTAGCCCACCTGT
GTTTAGGGTCAAATGGGCGTTGGAAATCAAGGGTGTTAAGTACGAGTACA
TAGAAGAAGACATCTTTAATAAGAGCACCTTGCTCATGGAACTGAACCCA
GTTCATAAGAAGGTCCCGGTGCTGGTTCATGATGGGAAAGCGATTGCAGA
ATCCTTTGTTATTCTTGAATATATTGATGAAACATGGAAGCAAAATCCAT
TGCTGCCTCAAGATCCTTACCAAAGAGCACTGGCTAGATTTTGGGCTAAA
TTTGCTGAAGAGAAGATTTTGAGAGGTGCATGGAATGCTTTGTGCTCCCA
AGGAGAAGAAAAGCAAAAGGCTTTGGAACAAACCATAGAAGCCATGGAGA
AAATAGAGGGAGAACTTGAAGGGAAGGAGCAGTTCTTTGGAGGGGAGAGC
GTTGGGTATTTGGACATTATATTGGGTTGGATCTCTTACTGCCTTCCAGT
ATGGGAAGAAGTTGGATCCATGCAAATTCTGAACCCACTTAAATTTCCAG
CCATCACTGCCTGGATCAATAGGTTCCTGAATCATCCTGTGGTCAAAGAC
AAACTACCACCAACTGATCAGATGCTTGTTTATTTCCACCAGCGCAGCAA
AGCATTAGCTTCTACATCTCATGGGTGA
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protein sequence of Tc04v2_p020880.1

>Tc04v2_p020880.1 ID=Tc04v2_p020880.1|Name=Tc04v2_p020880.1|organism=Theobroma cacao|type=polypeptide|length=226bp
MATEEVKLLGFWVSPPVFRVKWALEIKGVKYEYIEEDIFNKSTLLMELNP
VHKKVPVLVHDGKAIAESFVILEYIDETWKQNPLLPQDPYQRALARFWAK
FAEEKILRGAWNALCSQGEEKQKALEQTIEAMEKIEGELEGKEQFFGGES
VGYLDIILGWISYCLPVWEEVGSMQILNPLKFPAITAWINRFLNHPVVKD
KLPPTDQMLVYFHQRSKALASTSHG*
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