Tc04v2_t020750.4

Overview
NameTc04v2_t020750.4
Unique NameTc04v2_t020750.4
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length990
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 63 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
Productserine/threonine-protein phosphatase PP1 isozyme 2, transcript variant X2
NoteSerine/threonine-protein phosphatase PP1
Cross References
External references for this mRNA
DatabaseAccession
GeneID18603210
GenbankXM_018120344.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc04v2_g020750Tc04v2_g020750Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc04v2_p020750.4Tc04v2_p020750.4Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto240777auto240777Theobroma cacaoexon
exon-auto240778auto240778Theobroma cacaoexon
exon-auto240779auto240779Theobroma cacaoexon
exon-auto240780auto240780Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto240781auto240781Theobroma cacaoCDS
CDS-auto240782auto240782Theobroma cacaoCDS
CDS-auto240783auto240783Theobroma cacaoCDS
CDS-auto240784auto240784Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc04v2_t020750.4 ID=Tc04v2_t020750.4|Name=Tc04v2_t020750.4|organism=Theobroma cacao|type=mRNA|length=990bp
ATGGAACCTCGAGTTCTTGATGGTATAATCAATAGGTTGCTTGAAGTTAG
AGGGAAACCGGGGAAGCAAGTGCAGCTTTCCGAGTCCGAAATAAGGCAGC
TTTGTCTTGTTTCTAAAGATATCTTCTTGATGCAGCCCATTCTTCTAGAG
CTTGAAGCACCAATTAAGATCTGTGGAGATATTCATGGTCAGTATTCTGA
TCTCCTGAGGCTTTTTGAGAATGGTGGTTTCCCTCCTCGTGCCAATTACT
TATTCTTGGGGGATTATGTAGATCGTGGAAAGCAAAGCCTGGAAACAATA
TGCCTTCTCCTTGCATACAAAATAAAATATCCGGAAAACTTTTTCCTTCT
CAGGGGCAACCACGAATGTGCTTCTGTGAATCGTATCTATGGATTTTATG
ATGAATGTAAGAGAAGATTCAATGTCAGGCTCTGGAAAGTATTCACCGAC
TGTTTCAACTGCCTGCCTGTGGCTGCTCTGATTGAGGAAAAGATATTCTG
CATGCATGGGGGACTTTCACCTGAGCTCCGCAACTTGGACCAGATTAGAA
ATTTAAAGAGGCCTACTGATGTTCCAGAATCCGGCTTACTATGTGATCTC
CTATGGTCTGATCCTAGTAAAGACATTCAGGGCTGGGGGCCAAATGATAG
GGGAGTTTCCTATATGTTTGGTGGTGATAGGGTGATAGATTGTCTCAAGA
AGCTTGATCTTGATTTAATATGTCGAGCTCACCAGGTTGTTGAAGATGGA
TATGAATTCTTTGCTAATAGGCAACTTGTAACCATATTTTCAGCACCTAA
TTACTGTGGAGAGTTTGACAATGCTGCTGCCATGATGAGCGTGGATGAGA
CATTAATGTGCTCTTTCCAAATATTAAAGCCTGCAGATAAGAAACCGAAG
TTTGGCTTTGGAACCTTAACTCCAACAAAGCCTTCTACTCCTTCCTCTAG
AATCAAGTCATTTCTTGGAGCAAAGGTATATGGTGTTTGA
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protein sequence of Tc04v2_p020750.4

>Tc04v2_p020750.4 ID=Tc04v2_p020750.4|Name=Tc04v2_p020750.4|organism=Theobroma cacao|type=polypeptide|length=330bp
MEPRVLDGIINRLLEVRGKPGKQVQLSESEIRQLCLVSKDIFLMQPILLE
LEAPIKICGDIHGQYSDLLRLFENGGFPPRANYLFLGDYVDRGKQSLETI
CLLLAYKIKYPENFFLLRGNHECASVNRIYGFYDECKRRFNVRLWKVFTD
CFNCLPVAALIEEKIFCMHGGLSPELRNLDQIRNLKRPTDVPESGLLCDL
LWSDPSKDIQGWGPNDRGVSYMFGGDRVIDCLKKLDLDLICRAHQVVEDG
YEFFANRQLVTIFSAPNYCGEFDNAAAMMSVDETLMCSFQILKPADKKPK
FGFGTLTPTKPSTPSSRIKSFLGAKVYGV*
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