Tc04v2_t020750.3

Overview
NameTc04v2_t020750.3
Unique NameTc04v2_t020750.3
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length987
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 60 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
Productserine/threonine-protein phosphatase PP1 isozyme 2, transcript variant X3
NoteSerine/threonine-protein phosphatase PP1
Cross References
External references for this mRNA
DatabaseAccession
GeneID18603210
GenbankXM_018120345.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc04v2_g020750Tc04v2_g020750Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc04v2_p020750.3Tc04v2_p020750.3Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto240767auto240767Theobroma cacaoexon
exon-auto240768auto240768Theobroma cacaoexon
exon-auto240769auto240769Theobroma cacaoexon
exon-auto240770auto240770Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto240771auto240771Theobroma cacaoCDS
CDS-auto240772auto240772Theobroma cacaoCDS
CDS-auto240773auto240773Theobroma cacaoCDS
CDS-auto240774auto240774Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc04v2_t020750.3 ID=Tc04v2_t020750.3|Name=Tc04v2_t020750.3|organism=Theobroma cacao|type=mRNA|length=987bp
ATGGAACCTCGAGTTCTTGATGGTATAATCAATAGGTTGCTTGAAGTTAG
AGGGAAACCGGGGAAGCAAGTGCAGCTTTCCGAGTCCGAAATAAGGCAGC
TTTGTCTTGTTTCTAAAGATATCTTCTTGATGCAGCCCATTCTTCTAGAG
CTTGAAGCACCAATTAAGATCTGTGGAGATATTCATGGTCAGTATTCTGA
TCTCCTGAGGCTTTTTGAGAATGGTGGTTTCCCTCCTCGTGCCAATTACT
TATTCTTGGGGGATTATGTAGATCGTGGAAAGCAAAGCCTGGAAACAATA
TGCCTTCTCCTTGCATACAAAATAAAATATCCGGAAAACTTTTTCCTTCT
CAGGGGCAACCACGAATGTGCTTCTGTGAATCGTATCTATGGATTTTATG
ATGAATGTAAGAGAAGATTCAATGTCAGGCTCTGGAAAGTATTCACCGAC
TGTTTCAACTGCCTGCCTGTGGCTGCTCTGATTGAGGAAAAGATATTCTG
CATGCATGGGGGACTTTCACCTGAGCTCCGCAACTTGGACCAGATTAGAA
ATTTAAAGAGGCCTACTGATGTTCCAGAATCCGGCTTACTATGTGATCTC
CTATGGTCTGATCCTAGTAAAGACATTCAGGGCTGGGGGCCAAATGATAG
GGGAGTTTCCTATATGTTTGGTGGTGATAGGGTGATAGATTGTCTCAAGA
AGCTTGATCTTGATTTAATATGTCGAGCTCACCAGGTTGTTGAAGATGGA
TATGAATTCTTTGCTAATAGGCAACTTGTAACCATATTTTCAGCACCTAA
TTACTGTGGAGAGTTTGACAATGCTGCTGCCATGATGAGCGTGGATGAGA
CATTAATGTGCTCTTTCCAAATATTAAAGCCTGCAGATAAGAAACCGAAG
TTTGGCTTTGGAACCTTAACTCCAACAAAGCCTTCTACTCCTTCCTCTAG
AATCAAGGAGCAGGAGGAGGGTTGCCACTTGATGTAA
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protein sequence of Tc04v2_p020750.3

>Tc04v2_p020750.3 ID=Tc04v2_p020750.3|Name=Tc04v2_p020750.3|organism=Theobroma cacao|type=polypeptide|length=329bp
MEPRVLDGIINRLLEVRGKPGKQVQLSESEIRQLCLVSKDIFLMQPILLE
LEAPIKICGDIHGQYSDLLRLFENGGFPPRANYLFLGDYVDRGKQSLETI
CLLLAYKIKYPENFFLLRGNHECASVNRIYGFYDECKRRFNVRLWKVFTD
CFNCLPVAALIEEKIFCMHGGLSPELRNLDQIRNLKRPTDVPESGLLCDL
LWSDPSKDIQGWGPNDRGVSYMFGGDRVIDCLKKLDLDLICRAHQVVEDG
YEFFANRQLVTIFSAPNYCGEFDNAAAMMSVDETLMCSFQILKPADKKPK
FGFGTLTPTKPSTPSSRIKEQEEGCHLM*
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