Tc04v2_t020700.1

Overview
NameTc04v2_t020700.1
Unique NameTc04v2_t020700.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length645
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 7 ESTs, 56 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
Productethylene-responsive transcription factor 1B
NoteEthylene-responsive transcription factor 1B
Cross References
External references for this mRNA
DatabaseAccession
GeneID18603203
GenbankXM_007035031.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc04v2_g020700Tc04v2_g020700Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc04v2_p020700.1Tc04v2_p020700.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto240717auto240717Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto240718auto240718Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc04v2_t020700.1 ID=Tc04v2_t020700.1|Name=Tc04v2_t020700.1|organism=Theobroma cacao|type=mRNA|length=645bp
ATGGATTCCTGCCTCTTTCACTCTCCGAATTCCAACTCCTCATCGGAATC
TTCATTCGGATCGCCGGAGTTCTTCCCTTTGCACAACAACCATCTTCCTT
TCAACGAAAATGACTCCGAGGAGATGCTTTTATACGGGCTACTCGCGGAG
GCTACACAAGAAACATCAGAAATAACGTATCCTAATCAAGTAAAGGAAGA
AGAGGTTAGTTCAATGGAAAAGGAAAGTCCAAAGAAAGAAAAGTCTTACC
GGGGTGTAAGAAGGCGTCCGTGGGGGAAGTTTGCGGCTGAGATAAGGGAT
TCTACCAGGCACGGCATAAGGGTTTGGCTTGGAACATTTGACAGTGCGGA
AGCTGCTGCTTTGGCTTATGATCAAGCTGCTTTCGCCATGAGAGGCTCCG
CTGCGATACTCAACTTTCCGGTGGAAAGAGTGCAAGAGTCACTGAGAGAC
ATGAAGTGCCACCAGGAGGAAGGGTGTTCGCCGGTGGTGGCTTTAAAGAG
AAAACACTCCATGAGGAGGAAAATGATAAGCAGAAGCAAGAAAGAAAGAG
ATGTCAGGATAAACAATGTGATGGTGTTGGAGGATTTAGGTGCAGATTAC
TTAGAAGAACTTTTGACTACATCTGAAACTGCTAGACCTTGGTGA
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protein sequence of Tc04v2_p020700.1

>Tc04v2_p020700.1 ID=Tc04v2_p020700.1|Name=Tc04v2_p020700.1|organism=Theobroma cacao|type=polypeptide|length=215bp
MDSCLFHSPNSNSSSESSFGSPEFFPLHNNHLPFNENDSEEMLLYGLLAE
ATQETSEITYPNQVKEEEVSSMEKESPKKEKSYRGVRRRPWGKFAAEIRD
STRHGIRVWLGTFDSAEAAALAYDQAAFAMRGSAAILNFPVERVQESLRD
MKCHQEEGCSPVVALKRKHSMRRKMISRSKKERDVRINNVMVLEDLGADY
LEELLTTSETARPW*
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