Tc04v2_t020010.1

Overview
NameTc04v2_t020010.1
Unique NameTc04v2_t020010.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length765
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 36 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
Productauxin-responsive protein IAA14
NoteAuxin-responsive protein IAA14
Cross References
External references for this mRNA
DatabaseAccession
GeneID18603117
GenbankXM_007034894.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc04v2_g020010Tc04v2_g020010Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc04v2_p020010.1Tc04v2_p020010.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto239411auto239411Theobroma cacaoexon
exon-auto239412auto239412Theobroma cacaoexon
exon-auto239413auto239413Theobroma cacaoexon
exon-auto239414auto239414Theobroma cacaoexon
exon-auto239415auto239415Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto239416auto239416Theobroma cacaoCDS
CDS-auto239417auto239417Theobroma cacaoCDS
CDS-auto239418auto239418Theobroma cacaoCDS
CDS-auto239419auto239419Theobroma cacaoCDS
CDS-auto239420auto239420Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc04v2_t020010.1 ID=Tc04v2_t020010.1|Name=Tc04v2_t020010.1|organism=Theobroma cacao|type=mRNA|length=765bp
ATGGAAGTTAGTCGCAAAATGGCCAACATGCTTGGTGCTGAGCGTGATTT
GAACTTCAAAGAGACTGAGCTGTGTCTTGGATTGCCTGGTGGAGGTGGAG
GTGGAGGAGGTGGTGGCGGAAATGAAGTGGAAACTCCAAAGACTACTGGG
AAAAGAGGCTTCTCTGAGACTGTTGATTTGAAGCTGAATCTTCAGTCTAA
GGAAACTGGCATGGATCTGAACAAGAACATAGAGAATGGTTCAAAAGAAA
AAACTCTCCTCCCTGCTTGCACCAAAGATCCTGCAAAACCACCAGCCAAG
GCACAAGTTGTGGGTTGGCCGCCAGTTCGATCTTACAGGAAGAACATTAT
GGCTAACCAGAAAAACAGCTGTGAGGAAAGTGATAAGAAAGCTAGCAGTG
GTGGTGCAGCGTTTGTGAAGGTTTGCATGGATGGTGCCCCATATCTGCGA
AAGGTAGATTTGAAGATGTACAAGAGCTACCAAGAGTTATCTGATGCCTT
GGCTAAGATGTTCAGTTCCTTCACTATGGGTAACTATGGAGCTCAAGGAA
TGATAGACTTCATGAATGAGAGCAAGTTGATGGATCTTCTCAACAGTTCC
GATTATGTGCCAACCTATGAAGATAAGGATGGTGACTGGATGCTCGTGGG
GGATGTCCCATGGGAGATGTTTGTTGACTCATGCAAGCGCTTGCGCATAA
TGAAAGGATCAGAAGCAATTGGGCTTGCTCCAAGAGCAATGGAGAAATGC
AAGAGCAGAGCCTAA
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protein sequence of Tc04v2_p020010.1

>Tc04v2_p020010.1 ID=Tc04v2_p020010.1|Name=Tc04v2_p020010.1|organism=Theobroma cacao|type=polypeptide|length=255bp
MEVSRKMANMLGAERDLNFKETELCLGLPGGGGGGGGGGGNEVETPKTTG
KRGFSETVDLKLNLQSKETGMDLNKNIENGSKEKTLLPACTKDPAKPPAK
AQVVGWPPVRSYRKNIMANQKNSCEESDKKASSGGAAFVKVCMDGAPYLR
KVDLKMYKSYQELSDALAKMFSSFTMGNYGAQGMIDFMNESKLMDLLNSS
DYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGLAPRAMEKC
KSRA*
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