Tc04v2_t016260.2

Overview
NameTc04v2_t016260.2
Unique NameTc04v2_t016260.2
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length480
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
Productactin-related protein 2/3 complex subunit 4, transcript variant X2
NoteActin-related protein 2/3 complex subunit 4
Cross References
External references for this mRNA
DatabaseAccession
GeneID18602694
GenbankXM_018118619.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc04v2_g016260Tc04v2_g016260Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc04v2_p016260.2Tc04v2_p016260.2Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto231468auto231468Theobroma cacaoexon
exon-auto231469auto231469Theobroma cacaoexon
exon-auto231470auto231470Theobroma cacaoexon
exon-auto231471auto231471Theobroma cacaoexon
exon-auto231472auto231472Theobroma cacaoexon
exon-auto231473auto231473Theobroma cacaoexon
exon-auto231474auto231474Theobroma cacaoexon
exon-auto231475auto231475Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto231476auto231476Theobroma cacaoCDS
CDS-auto231477auto231477Theobroma cacaoCDS
CDS-auto231478auto231478Theobroma cacaoCDS
CDS-auto231479auto231479Theobroma cacaoCDS
CDS-auto231480auto231480Theobroma cacaoCDS
CDS-auto231481auto231481Theobroma cacaoCDS
CDS-auto231482auto231482Theobroma cacaoCDS
CDS-auto231483auto231483Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc04v2_t016260.2 ID=Tc04v2_t016260.2|Name=Tc04v2_t016260.2|organism=Theobroma cacao|type=mRNA|length=480bp
ATGGCAAACACATTGAGGCTGTATTTGACTTGCATAAGGAACACTCTTGA
GGCTGCCATGTGTCTCCAGAACTTTCCATGTCAAGAAGTTGAAAGGCATA
ATAAGCCAGAAGTTGAACTAAAGACAAGCCCAGAACTTCTGCTAAATCCT
GTTTTGATATGTCGAAATGAGGCAGAAAAATGCTTAATAGAAACATCTAT
CAATTCACTTCGAATAAGCCTCAAGGTAAAACAAGCAGATGAACTTGAAA
ACATACTGACGAAAAAGTTTCTTAGATTTTTGTCAATGAGAGCAGAAGCA
TTTCAAGTTTTGAGACGAAAGCCAGTACAGGGTTATGATATCAGCTTTCT
TATCACAAACTACCACTGTGAAGAGATGCAGAAACAGAAGCTCATTGATT
TTATTGTGCAATTCATGGAGGCTAGGATAAAGCTTGGTTCTTGGCCTATC
ACTTTTCTACTTGAAACCGTACAAAACTAG
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protein sequence of Tc04v2_p016260.2

>Tc04v2_p016260.2 ID=Tc04v2_p016260.2|Name=Tc04v2_p016260.2|organism=Theobroma cacao|type=polypeptide|length=160bp
MANTLRLYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSPELLLNP
VLICRNEAEKCLIETSINSLRISLKVKQADELENILTKKFLRFLSMRAEA
FQVLRRKPVQGYDISFLITNYHCEEMQKQKLIDFIVQFMEARIKLGSWPI
TFLLETVQN*
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