Tc04v2_t015830.1

Overview
NameTc04v2_t015830.1
Unique NameTc04v2_t015830.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1458
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 72 ESTs, 57 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
Productadenosylhomocysteinase
NoteAdenosylhomocysteinase
Cross References
External references for this mRNA
DatabaseAccession
GeneID18602642
GenbankXM_018119875.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc04v2_g015830Tc04v2_g015830Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc04v2_p015830.1Tc04v2_p015830.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto230277auto230277Theobroma cacaoexon
exon-auto230278auto230278Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto230279auto230279Theobroma cacaoCDS
CDS-auto230280auto230280Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc04v2_t015830.1 ID=Tc04v2_t015830.1|Name=Tc04v2_t015830.1|organism=Theobroma cacao|type=mRNA|length=1458bp
ATGTCTCTTTTGGTCGAGAAAACCTCAAGCGGCCGTGAGTACAAGGTCAA
GGACATGTCTCAGGCCGACTTCGGTCGTCTCGAGATTGAGTTGGCCGAGG
TCGAAATGCCCGGTCTCATGGCTTGCAGAACCGAATTCGGCCCTTCCCAA
CCTTTCAAAGGAGCTAAAATCACCGGTTCCCTCCACATGACCATCCAAAC
CGCTGTTCTCATCGAAACGCTCACCGCCCTCGGAGCCGAAGTCCGTTGGT
GCTCATGCAACATTTTCTCAACCCAAGACCACGCCGCCTCCGCCATCGCT
CGTGACTCCGCTGCTGTATTTGCCTGGAAAGGGGAGACCCTCCAGGAGTA
CTGGTGGTGTACCGAGAGAGCCCTCGACTGGGGTCCCACTGGTGGACCCG
ATCTAATCGTGGATGATGGTGGGGATGCTACTTTGTTGATCCACGAAGGA
GTTAAAGCCGAGGAGGTTTATGAGAAAACTGGGCAGCTCCCGGATCCGGC
TTCTACAGATAACGCTGAGTTCCAAATTGTTTTGACGATAATCAGAGATG
GGTTGAAGACAGATCGCAAGAAGTATACCAGGATGAAGAATAGATTAGTT
GGTGTTTCTGAGGAAACTACAACTGGAGTTAAGAGGCTTTATCAGATGCA
GGCCAATGGATCCTTGTTGTTTCCCGCTATTAATGTCAATGACTCTGTCA
CCAAGAGCAAGTTTGATAACTTGTATGGGTGCCGTCACTCTCTTCCTGAT
GGTTTGATGAGAGCAACTGATGTCATGATTGCTGGCAAGGTTGCTGTTGT
CTGTGGTTATGGTGATGTTGGCAAGGGCTGCGCTGCAGCCTTGAAACAAG
CTGGTGCTCGCGTCATTGTCACTGAGATTGATCCCATCTGTGCACTTCAG
GCTCTTATGGAAGGACTTCAGGTTCTGACTCTTGAGGATGTTGTCTGCGA
GGCTGATATCTTTGTCACCACCACTGGTAACAAAGACATCATCATGGTTG
ATCACATGAGGAAGATGAAGAACAATGCCATTGTTTGCAACATTGGTCAC
TTTGACAATGAAATCGATATGTGTGGTCTTGAGAACTATCCTGGTGTCAA
GCGCATCACCATCAAGCCTCAAACTGATAGGTGGGTCTTCCCTGATACCA
ACTCAGGTATCATCGTATTGGCTGAGGGGCGTCTCATGAACTTGGGCTGT
GCCACTGGCCATCCCAGTTTTGTTATGTCCTGCTCATTCACAAACCAGGT
GATTGCCCAGCTTGAGCTGTGGAATGAGAAGGCAACCGGCAAGTATGAGA
AAAAGGTGTATGTTTTGCCCAAGCACCTTGATGAGAAGGTTGCTGCTCTT
CACCTTGCCAAGCTTGGAGCTAAGCTCACCAAGCTCAGCAAGGAACAAGC
TGATTACATTAGCGTGCCCGTTGAGGGTCCCTACAAGCCTGCTCACTACA
GGTACTGA
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protein sequence of Tc04v2_p015830.1

>Tc04v2_p015830.1 ID=Tc04v2_p015830.1|Name=Tc04v2_p015830.1|organism=Theobroma cacao|type=polypeptide|length=486bp
MSLLVEKTSSGREYKVKDMSQADFGRLEIELAEVEMPGLMACRTEFGPSQ
PFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAASAIA
RDSAAVFAWKGETLQEYWWCTERALDWGPTGGPDLIVDDGGDATLLIHEG
VKAEEVYEKTGQLPDPASTDNAEFQIVLTIIRDGLKTDRKKYTRMKNRLV
GVSEETTTGVKRLYQMQANGSLLFPAINVNDSVTKSKFDNLYGCRHSLPD
GLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQ
ALMEGLQVLTLEDVVCEADIFVTTTGNKDIIMVDHMRKMKNNAIVCNIGH
FDNEIDMCGLENYPGVKRITIKPQTDRWVFPDTNSGIIVLAEGRLMNLGC
ATGHPSFVMSCSFTNQVIAQLELWNEKATGKYEKKVYVLPKHLDEKVAAL
HLAKLGAKLTKLSKEQADYISVPVEGPYKPAHYRY*
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