Tc04v2_t015400.1

Overview
NameTc04v2_t015400.1
Unique NameTc04v2_t015400.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length645
Properties
Property NameValue
Productras-related protein RABA5e
Model evidenceSupporting evidence includes similarity to: 1 EST, 172 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
NoteRas-related protein RABA5d
Cross References
External references for this mRNA
DatabaseAccession
GeneID18602596
GenbankXM_007034084.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc04v2_g015400Tc04v2_g015400Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc04v2_p015400.1Tc04v2_p015400.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto229475auto229475Theobroma cacaoexon
exon-auto229476auto229476Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto229477auto229477Theobroma cacaoCDS
CDS-auto229478auto229478Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc04v2_t015400.1 ID=Tc04v2_t015400.1|Name=Tc04v2_t015400.1|organism=Theobroma cacao|type=mRNA|length=645bp
ATGTCAGACGATGAAGCAGTGGAAGAGTACCTATTCAAAATAGTGATAAT
AGGGGACTCAGCCGTGGGAAAATCCAACCTTCTCACTCGATATGCACGTA
ACGAGTTCAATGCTCACTCCAAGGCAACCATAGGGGTGGAGTTTCAGACC
CAGAGCGTGGAGATTGATGGCAAGGATGTTAAGGCTCAGATTTGGGACAC
TGCAGGCCAAGAGCGTTTTCGTGCTGTGACTTCTGCTTATTACAGGGGTG
CTTTTGGTGCATTGTTGGTTTATGATATTAGCAGGAGAGCTACTTTTGAC
AATGTTGCTCGATGGCTCGATGAACTCAACTCACATTCTGATACGACAGT
GGCAAGGATGCTGGTGGGAAACAAATGCGATTTGGAAAATATCAGGGAAG
TGACTTTGGAAGAAGGTAAAAGCTTGGCAGAAGCAGAAGGCTTGTTTTTC
ATTGAGACATCTGCACTTGATTCCACCAACGTCAGAACTGCGTTTGAGAT
TGTCATTCGAGAGATCTATAACAACGTGAGCAGGAGAGTCTTGAATTCTG
ATTCATACAAAGCTGAGTTAACTGTCAATAGGGTGAGCCTTGTGAATGAT
GATGGCTTAAGGCAAACTCAGACCAAGAACTCATGCTGTTCTTGA
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protein sequence of Tc04v2_p015400.1

>Tc04v2_p015400.1 ID=Tc04v2_p015400.1|Name=Tc04v2_p015400.1|organism=Theobroma cacao|type=polypeptide|length=215bp
MSDDEAVEEYLFKIVIIGDSAVGKSNLLTRYARNEFNAHSKATIGVEFQT
QSVEIDGKDVKAQIWDTAGQERFRAVTSAYYRGAFGALLVYDISRRATFD
NVARWLDELNSHSDTTVARMLVGNKCDLENIREVTLEEGKSLAEAEGLFF
IETSALDSTNVRTAFEIVIREIYNNVSRRVLNSDSYKAELTVNRVSLVND
DGLRQTQTKNSCCS*
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