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Properties
| Property Name | Value |
|---|
| Model evidence | Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments |
| Product | DNA-directed RNA polymerase II subunit RPB1 |
| Note | Uncharacterized protein |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| exon-auto227116 | auto227116 | Theobroma cacao | exon |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| CDS-auto227117 | auto227117 | Theobroma cacao | CDS |
Sequences
The following sequences are available for this feature:
mRNA sequence >Tc04v2_t014510.1 ID=Tc04v2_t014510.1|Name=Tc04v2_t014510.1|organism=Theobroma cacao|type=mRNA|length=2106bp
ATGGCCTTCACCAGTTGTTTCTTATTGGCTTTCTCTATTGTTGTCATGCT
TTCAGGCATTGATACAAACTTGGCAGCTCGCTATCTGCTTGACAAGACAC
GGTCTCCAGCTCCATCTGTGCTGTCCGTGTCTGCTCCACAATCATCACTG
CCTCCGCACAGTTCAAAATCAAGTTTCACAGCACCTGCAGAGCCTCCTTT
GGCCGGCTCTCAACCATCCGTTTCTAGTTCCATGCCCAGTTCATCAGAAT
CAACGACACCATCCTCAGCTTCAGATAAACCATCTCTGCCTAATTCTACG
CCAAGCTTGACACAGCCCGCAGCAGCGCCTAAAGCTTCTACTCAGCCATC
TTTATCTAAAACAATCCCAAGCTCAACACAGCCCACACCCTCTCAGCAAG
CTTCCCGTAATTCAATCCCTGGCTCGAGAGAACCAACAATGGCTCCAATG
GGTTCCTCTCATCCGTCCTTGTCTAATACAGAGCCAAGCTTGACACAACC
CGCAATGTCACCTTTAGCTAATGCCCCACCATCTTCGTCTACTAATAATC
CATCTCTGTCCAATTCAACAAACAACTTGGCACAGCCTGCTGTGGCACCT
ATGGCTTCTACTCATCCGTCTTCTCCAGATAAAGTACCAAGTTTGGCAGT
GCCTGCTACCTCGCCTTCAGCTACTACCCAACCATCGTTGCCTACTAATA
ATTCACCTTCGTCCAATTCAATGCCAGGCTTGGCACAGCCTGCTATGGCA
CCTATGGATTCTACTCATCCATCTGCACCAGGTAAAGTGCCAAGCTTGGC
ACTGCCTGCAACGTCTCCTTCAGAAACTACCCAACCATCGTTGCCTAATC
CATCTTCGTCCAACTCAACATCAGGCTTGACACAACATGGAATGGCACCT
ATGGCTTCCTCTCTGCCATCTTCACCAGATAAGATGCCAAGCTTGACACT
GCCTGCAACATCACCTTCTGCTACCAGCCAACCATCTTTGCCTACTAATA
GTCCATCATTCTCCAATTCAACGCCAAGCTTGGCACAACCTGGAATGGCA
CCTATGGCTTCCTCTCAACCATCATTGTCAAACTCAACGCCGAGCTTGGG
ACTGCCTTCAATGTCGCCTTCTGCTACCAGCCAACCATCTTTACCTGCAA
ATATTCCATCGTTCTCCAACTCAACACCAAGCTTGGCACAACCTGGAATG
GCACCTATGGCTTCCTCTCAACCATCATTGTCAAACTCAACGCCAAGCTT
GGGACTGCCTTCGATGTCGCCTTCTGCTACCAGCCAACCATCTTTGCCCA
CAAATATTCCATCGTTCTCCAACTCAACACCAAGCTTGGCACAACCTGGA
ATGCCACCTATGTCTTCCTCGCAACCATCATTACCAAACTCAACGCCGAG
CTTGACACAACCTGGTATGGCACCAATGGCTTCGTCTCAACCATCATTGT
CAAATTCAACTCCAAGCTTGGGACTGCCTTCAATGTCGCCTTCTGCTACC
AGCCAACCATCTTTGCCTACAAATAGCCCATCGTTCTCCAACTCAACGTC
AAGCTTGACACAACCTGGAATGGCACCTATAGCTTCCTCTCAACCATCTT
CGCCTGATAAAATCCCAAGCTTGGCATTGCCTTCAAATTCACCTTCTAAT
ACCACCCAACCGTCGTTGCCTAACAATATTAATCCATCATTATCCAACTC
AACCCCAAGCTTGACACAACCTGCAATATCACCTTCAGCTCATCAAGCTT
CGCCCCAATCCTCAATGACACCTACGGCTTCACCAAATCATACATCTCCG
TCTAATATTGCACCGAAGGCTTCCTCGCAACCATCTTTACCAAACACGAC
TCCAAGCTCGACACAATCAGCAGTTGCGCCTTCTCCTACTGCTCATCCAT
CTTCGTCTAATACAACGTCAGGGTTAAAACAACCCGCGATGGCGCCGCCA
AGGACATCTGAGACACCTTTGCGTGGAGCTTCCTTGCCTCCACTTTCTGG
CATGAACCCCACTACGCCAACAAATGCAAGCACAACGCTACCGTCAATCC
CAACGAAAATCTCTTTCCCATTCCTTCCGCCACCATCTACCAAAACTAGG
CCTTGA back to topprotein sequence of Tc04v2_p014510.1 >Tc04v2_p014510.1 ID=Tc04v2_p014510.1|Name=Tc04v2_p014510.1|organism=Theobroma cacao|type=polypeptide|length=702bp
MAFTSCFLLAFSIVVMLSGIDTNLAARYLLDKTRSPAPSVLSVSAPQSSL
PPHSSKSSFTAPAEPPLAGSQPSVSSSMPSSSESTTPSSASDKPSLPNST
PSLTQPAAAPKASTQPSLSKTIPSSTQPTPSQQASRNSIPGSREPTMAPM
GSSHPSLSNTEPSLTQPAMSPLANAPPSSSTNNPSLSNSTNNLAQPAVAP
MASTHPSSPDKVPSLAVPATSPSATTQPSLPTNNSPSSNSMPGLAQPAMA
PMDSTHPSAPGKVPSLALPATSPSETTQPSLPNPSSSNSTSGLTQHGMAP
MASSLPSSPDKMPSLTLPATSPSATSQPSLPTNSPSFSNSTPSLAQPGMA
PMASSQPSLSNSTPSLGLPSMSPSATSQPSLPANIPSFSNSTPSLAQPGM
APMASSQPSLSNSTPSLGLPSMSPSATSQPSLPTNIPSFSNSTPSLAQPG
MPPMSSSQPSLPNSTPSLTQPGMAPMASSQPSLSNSTPSLGLPSMSPSAT
SQPSLPTNSPSFSNSTSSLTQPGMAPIASSQPSSPDKIPSLALPSNSPSN
TTQPSLPNNINPSLSNSTPSLTQPAISPSAHQASPQSSMTPTASPNHTSP
SNIAPKASSQPSLPNTTPSSTQSAVAPSPTAHPSSSNTTSGLKQPAMAPP
RTSETPLRGASLPPLSGMNPTTPTNASTTLPSIPTKISFPFLPPPSTKTR
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