Tc04v2_t013590.1

Overview
NameTc04v2_t013590.1
Unique NameTc04v2_t013590.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length690
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 1 EST, 40 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
Productendochitinase EP3
NoteEndochitinase EP3
Cross References
External references for this mRNA
DatabaseAccession
GeneID18602389
GenbankXM_007033740.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc04v2_g013590Tc04v2_g013590Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc04v2_p013590.1Tc04v2_p013590.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto224791auto224791Theobroma cacaoexon
exon-auto224792auto224792Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto224793auto224793Theobroma cacaoCDS
CDS-auto224794auto224794Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc04v2_t013590.1 ID=Tc04v2_t013590.1|Name=Tc04v2_t013590.1|organism=Theobroma cacao|type=mRNA|length=690bp
ATGGTATTTCTTAATATGACCAAAGGTCTGCTAGCAGCCATTGTTCTGGC
TGGTATTCTCGCTGGATCGGTGCCGGTAAAGGCTCAACCACTGGCTGATA
TACTAACGCCTGCGTTCTTTAATGGGATTTTGGATCAGGCAGATCCAAGT
TGTGAAGGGAGGAACTTTTACTCAAGGGATACATTTCTTAAGGCTGCCGA
TTCTTTCCCTCAGTTTGGTTCAGTTGATGGTATTAGGCGTGAGGTTGCAG
CTTTATTTGCACATGTCACGCATGAGACAGGACATTTCTGCTTTATAGAA
GAGATAGGTGGTGCAACAAGGGACTACTGTGATGAGACCGTTACACAGTA
TCCGTGCAACCCTGACAGAGGTTACTATGGCCGTGGACCGATCCAACTAT
CCTGGAATTTCAACTATGGACCAGCTGGGGATAGCATCGGCTTTGATGGA
CTAAACTCGCCTGAAACTATCGCCACAGACCCTGTTATCTCGTTCAAGAC
GGCCTTGTGGTACTGGGTGAACTTTGTCCACCCTGTCATAGGCCAAGGGT
TCGGGGCAACTATTCGTGCCATTAATGGGGCTATTGAGTGCGATGGCGGA
AACCCTGATACCGTTCAGGCTCGTGTTAACTACTATACTCAATATTGTAA
CCAGCTTGGTGTTGATCCCGGCCAAAATCTCACCTGCTAG
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protein sequence of Tc04v2_p013590.1

>Tc04v2_p013590.1 ID=Tc04v2_p013590.1|Name=Tc04v2_p013590.1|organism=Theobroma cacao|type=polypeptide|length=230bp
MVFLNMTKGLLAAIVLAGILAGSVPVKAQPLADILTPAFFNGILDQADPS
CEGRNFYSRDTFLKAADSFPQFGSVDGIRREVAALFAHVTHETGHFCFIE
EIGGATRDYCDETVTQYPCNPDRGYYGRGPIQLSWNFNYGPAGDSIGFDG
LNSPETIATDPVISFKTALWYWVNFVHPVIGQGFGATIRAINGAIECDGG
NPDTVQARVNYYTQYCNQLGVDPGQNLTC*
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