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Properties
Property Name | Value |
Model evidence | Supporting evidence includes similarity to: 26 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns |
Product | shikimate O-hydroxycinnamoyltransferase, transcript variant X3 |
Note | Shikimate O-hydroxycinnamoyltransferase |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
CDS-auto223250 | auto223250 | Theobroma cacao | CDS |
Sequences
The following sequences are available for this feature:
mRNA sequence >Tc04v2_t013010.1 ID=Tc04v2_t013010.1|Name=Tc04v2_t013010.1|organism=Theobroma cacao|type=mRNA|length=1302bp ATGGAGATTTCAATCAAGGAGTCAACAATGGTTCGTCCAGCTCAAGAAAC TCCAAACCAATGGCTCTGGATGTCTAACATGGATGAGATAGTGATAAGAA GTCATATCCCCACAGTATATTTCTACATACCAGATGGTTCTTCCAATTGT TTTGATGTCGAAAGGCTTAAGGGGTCTTTGAGCAGAATTCTTGTTCCATT CTACCCGGTAGCCGGAAGATTGAGATTCGATGAAAACGAAAGACTTGAGC TAATTTGCAATGCCGAGGGAGTACTGTTTATTGAGGCTGAAACTTCTTCT GAGATGGATCTCTTAACTGGCGATTTTACAGATAGCTCACAAGTTTGGCG ACTAGTTCCAGCAGTGGACTATTCAGGTGGAATATCTTCTTATCCACTTT TCATATTGCAGGTAACTAGTTTTAAATGCGGAGGAATCAGTATTGGAGTT GGAGTTCATCATAGTTTAGCAGATGGTACATCTGCTCTTAATTTTATTAA TAGTTGGTCTGATATGGCACGAGGCATACCCCTCTGCCTTGAACCATTGT TTGATCGGACCCTTCTCCGAGCTCGAGTGCCACCTACTCCCAAATTTCAC CATATAGAATATGAACCATCTCCTCCCCTTATCACAGAATCTGAATCACA TCCTAAATCTTCAATCGTATCTGTTTTTAATATCACAGCTGATCATGTAA ACACCTTAAAAGCCAAGTCGCAAGAAAATATTGCAGATACTTCTACTACC AAGTTTAGCACCTTCAATGTCCTCGCTGCACATATATGGCGTTGCGTGAC CAGAGCTCGATTCCTCTCAAACGATCAGCCAACCAAGTTATACATGGCGG TTGATGGCCGATCCCGATTGCATCCTGCTCTCCCGTCGGAATACTTTGGC AATGTAATCTTCACCACTGCAACAATTGCTGTAGCTGGTGATCTTCAATC GGAACCAATTACAGATACGGAAAAGAGAATCCAAAAAGCATTGACGCAAA TGGACAATGAATATTTAAGATCAATTCTTGACTACATGGAACTGCCTGGC GTAAAAGATTTGGCGCGAGGATCACGGACTATCCATTCTCCAAATCTTGG TATTGTCAGTTGGATGCGGTTGCCTATTTATGAAGCAGATTTTGGATGGG GTCGTCCTGTATATATGAGGCCGGCGAAGGTTCTGGTCGAAGGATTGGTA TATATAACTCGGACTCCAAAGAATGATGGGAGCTTATCAGTGGTGACACG CTTGGAGGCCTCTGAAATGAAACTCTTTGGAGAGCTTCTTTACAAATTCT AA back to topprotein sequence of Tc04v2_p013010.1 >Tc04v2_p013010.1 ID=Tc04v2_p013010.1|Name=Tc04v2_p013010.1|organism=Theobroma cacao|type=polypeptide|length=434bp
MEISIKESTMVRPAQETPNQWLWMSNMDEIVIRSHIPTVYFYIPDGSSNC FDVERLKGSLSRILVPFYPVAGRLRFDENERLELICNAEGVLFIEAETSS EMDLLTGDFTDSSQVWRLVPAVDYSGGISSYPLFILQVTSFKCGGISIGV GVHHSLADGTSALNFINSWSDMARGIPLCLEPLFDRTLLRARVPPTPKFH HIEYEPSPPLITESESHPKSSIVSVFNITADHVNTLKAKSQENIADTSTT KFSTFNVLAAHIWRCVTRARFLSNDQPTKLYMAVDGRSRLHPALPSEYFG NVIFTTATIAVAGDLQSEPITDTEKRIQKALTQMDNEYLRSILDYMELPG VKDLARGSRTIHSPNLGIVSWMRLPIYEADFGWGRPVYMRPAKVLVEGLV YITRTPKNDGSLSVVTRLEASEMKLFGELLYKF* back to top
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