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Properties
Property Name | Value |
Model evidence | Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns |
Product | putative disease resistance protein RGA1, transcript variant X2 |
Note | Putative disease resistance protein RGA4 |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Tc04v2_t010350.2 ID=Tc04v2_t010350.2|Name=Tc04v2_t010350.2|organism=Theobroma cacao|type=mRNA|length=3465bp ATGGCAGATGCTCTTCTTTCAGCCGTTCTAAACACCATCTTGGAGAACAT AAACTCCCTGTGGCTTGAAGAGTTTGGGATCACAGGGGGATTGAAAACCG AGCTTGAGAGTCTGCAGAGCACCTTAAGTACGATCCAAGCGGTACTTCTT GATGCAGAGGAGAAGCAGTGGAAGAGTGAGGCTATCAAGAATTGGCTGGG AAAACTCAAAGATACGGCTTATCATCTAGATGATATACTAGATGAGTTTG CAACAAACACTCAAAAAGAAAGGCTGCAGAGAGATGCTAGAAGCCAGGTA TGCACCTTCCATTACCTTCCTAAACAGCTTTTATTTCGCTCAAAGATGGC GCATAAGTTGAAGGATGTTAGAGAAAAATTGGATGCAGTTGCTGGGGAGA GATCCAAGTTCCATTTGAGAGAAGGGATGGAGCCCTTGGAGGACAGAGAA GTGAGTGATACAGAGTGGAGAAAAACTAGCTCACTTGTAAATGAATTAGA GGTGTATGGAAGAGATAAGGAGCTGGATAGAATAATCAATATGCTGTTGA ACAATTTAGCAGATCAGGATGGGATTTCTGTTTACACTATATGTGGCATG GGAGGACTCGGAAAGACAACACTTGCTCAATTGGTTTATAATGATGAAAG CATAAGAAAGGCTTTTGATTTGAGAATTTGGGTATGTGTATCCGATGATT TTGATATTACAAGATTAACAAAAGCCATTATAGAGTCCATTGAAGGAAAG TGCAGTATAGAAGAACTAGATCCCCTGCTAAGACACCTACAAGAAAAACT AATTGGGAAAAGGTTTTTGCTTGTATTGGATGATGTGTGGAATGAATATC ACGAAAAGTGGGAAGGATTGAAGGAAGCATTTAGATGCGGTGCGAAAGGA AGCACAGTTATAGTCACTACCCGTATCGAGAAAGTTGCCCTTATGATGAC AACTACTCCTATACACCACTTGGGAAGCTTGTCCTGTGATGATTCTTGGT CCTTATTCAAGCAGCGTGCGTTTAGGATGGGAAAGAGCGAGGATTACCCA CACTTAGAAGCACTTGGAAAGGAAATAGTTAAGAAGTGTGGGGGGGTGCC CTTAGCACTAAAGGCTTTGGGAGGTTTGTTGCGTTTCAAAGAAAGAGAGA GTGAGTGGCTATCGATCAAAGAAAGCGAGATGTGGGAATTGGCAGATGAG GGGAGCAAAGTCTTATCTGTGTTGAATTTGAGTTACAGACGTCTAAAACC GCATTTGAGACAATGTTTTACATTTTGCTCTATATTTCCCAAAGATTATA TCATGAGTAAAGAGCAGTTGATACAACTTTGGATGGCTAATGGCTTTGTT CCTGCAAGAGGACAAATGAATTTGCATGACATGGGCTGTGAAATCTTCAA TGAATTAGCTTGGAGGTCCTTTTTCCAAGAACTCGTGGAGGATTTTGAAG GAAATTCAACATGTAAAATGCATGACCTTATCCATGATCTTGCACAATCA ATTATGAGTTGCGAGTGCTCTGTGACTGAACCAAGTCAGCTAGTGTTGAC TGCGCCCAAAACAGTTCGTCACATGTTTGCTTCTGGTAATTCGTCTATAT TTGCTCCTTCAAATGTGGACAACCTACCCAAAGTCTGTTCCTTGCGCACA TTGTTTGTACGTAACAACTTCCATTGGAGAATTGCAACTAAACAGAAGCA TCTGAGGGCATTACACGTTACATTTAATGGAGGAATGAAAATCTCAATTG ATGATAAGTTCAGACATCTAAGGTATCTGAGCCTTGTTAATTCTGGAATT GAAACACTGCCAGAATCACTATGCAGCTTCCAAAAATTGCAGACACTAAA TCTGATATGTTGTTATCACCTTCGCAAATTACCCAAAGGTTTGAAGCTCT TGAAAAGTCTTACATATTTAGACATAAAATATTGTAATGCACTTACTCGT ATGCCTGTTGGCCTGGGGCAATTGTCTTGCTTGCGTAGGCTGAGCATGTT CATTGTGGGAAAGGACCGTGGTTGCTGTATAGACGAATTAAAAGGGCTGG CTCTTGAGGGAGAGCTTTGCATTGAAGAACTTGATAATGTAAAAAGTTTA ATAGATGCTAAAAGTGCCAATCTGATAATGAAGCAAAATCTAAGATCACT AGGCTTATCTTGGCGCAAAATCGACAATTGTTACCTACATGAAAATGCTG AAGAGGTTCTTAGTGGTCTCCAACCTCATTCAAGTTTGAAGACGCTAAGC ATACGAAATTACCATGGTCCAAAGTTTTCATATTGGTTGATGGATCTCCT TGTTCCAAACCTAGTTGACATCACACTGGTAAATTGTGAAAGATGTGAAT GCCTTCCACCTCTTGGTAAATTAGGCTTCCTCAAGTCCCTCACCATTACT GGAATGGATGCTCTAAAATCTATTGATAATAGCTTCTATGGAGATGGCGA GAGTTCATTCTCGTCACTGGAGAGTCTCTGTTTCGAGAATATGCTTTCTT TCGAGGAATGGACAACAGTGAAGGGGAAGGAAAATTTTCCTCAGCTAAGA TCATTAGTTATTAGAGATTGTCCGAAGCTAGTTGAAATGCCTATGCTTCA ATCTCTGAAAATATTAGAAATTAGCAAAACCAGCGTCTCATTACTTAGCT CCGTGATGCATTTCACTTTTCTCACCTCTCTCTTACTGGGCGGCTTTGAT GGCTTGACGGTTATGCCAGATGGACTATTGCAAAATCACAAGCACCTTGA AAGCTTGGAGATACGTTTTAAAAAGCTGAAATCTCTATCAAATCTTCTAG ATAACCTATCTGCTCTCGAGCAATTGGATCTTCAGGACTGCCTAGAGCTT GAAAATATTCCAGCAGGACTAGAAAACCTCAGCTCTTTGGAGAGATTGCA TTTAAGTGAGTGTAACAGCCTTGTAACCCTTCCAGAAGATGGATTGCGTG GTTTATCTTCCCTTTCTTCGCTGTGGTTTCAAGGGTGTCAGAAATTAGCC TCTTTATCTGATGGAGTGAGATATCTGACTTCGCTCCGAGACTTACTCGT CAATGATTGTCCAGAGTTAAACTCATTGCCCGAGTGTATCCAACATCTCT CTGCACTTCGGAGTTTGAGGATTTGGCATTGTGAGAGATTAACTTCTCTG CCAAATGGGATAGAAAACCTTGCCTTGCTTTCAGAATTGGAGATCATGCG TTGCGATAATCTAATGTGTCTGCCTCAAGGGCTACAGAGTCTCACGGCAC TCACAATACTGAGGATTGTAGGATGCCGACATCTGGAAAGGCGGTGCAGG AGAGAGAGAGGAGAGGATTGGCCCATCATAGCCCACATTCCTTCTATTGT AATCATGTCCCGTGGAGAGTACTTTTTTCGAGGACGAAGAAGGCCTCTTG GCAATCTGTTAACAAGGGTTGGTGATTGGACAAATGGGCTCTCCAGAAAG TTTTGGAAATCTTAG back to topprotein sequence of Tc04v2_p010350.2 >Tc04v2_p010350.2 ID=Tc04v2_p010350.2|Name=Tc04v2_p010350.2|organism=Theobroma cacao|type=polypeptide|length=1155bp
MADALLSAVLNTILENINSLWLEEFGITGGLKTELESLQSTLSTIQAVLL DAEEKQWKSEAIKNWLGKLKDTAYHLDDILDEFATNTQKERLQRDARSQV CTFHYLPKQLLFRSKMAHKLKDVREKLDAVAGERSKFHLREGMEPLEDRE VSDTEWRKTSSLVNELEVYGRDKELDRIINMLLNNLADQDGISVYTICGM GGLGKTTLAQLVYNDESIRKAFDLRIWVCVSDDFDITRLTKAIIESIEGK CSIEELDPLLRHLQEKLIGKRFLLVLDDVWNEYHEKWEGLKEAFRCGAKG STVIVTTRIEKVALMMTTTPIHHLGSLSCDDSWSLFKQRAFRMGKSEDYP HLEALGKEIVKKCGGVPLALKALGGLLRFKERESEWLSIKESEMWELADE GSKVLSVLNLSYRRLKPHLRQCFTFCSIFPKDYIMSKEQLIQLWMANGFV PARGQMNLHDMGCEIFNELAWRSFFQELVEDFEGNSTCKMHDLIHDLAQS IMSCECSVTEPSQLVLTAPKTVRHMFASGNSSIFAPSNVDNLPKVCSLRT LFVRNNFHWRIATKQKHLRALHVTFNGGMKISIDDKFRHLRYLSLVNSGI ETLPESLCSFQKLQTLNLICCYHLRKLPKGLKLLKSLTYLDIKYCNALTR MPVGLGQLSCLRRLSMFIVGKDRGCCIDELKGLALEGELCIEELDNVKSL IDAKSANLIMKQNLRSLGLSWRKIDNCYLHENAEEVLSGLQPHSSLKTLS IRNYHGPKFSYWLMDLLVPNLVDITLVNCERCECLPPLGKLGFLKSLTIT GMDALKSIDNSFYGDGESSFSSLESLCFENMLSFEEWTTVKGKENFPQLR SLVIRDCPKLVEMPMLQSLKILEISKTSVSLLSSVMHFTFLTSLLLGGFD GLTVMPDGLLQNHKHLESLEIRFKKLKSLSNLLDNLSALEQLDLQDCLEL ENIPAGLENLSSLERLHLSECNSLVTLPEDGLRGLSSLSSLWFQGCQKLA SLSDGVRYLTSLRDLLVNDCPELNSLPECIQHLSALRSLRIWHCERLTSL PNGIENLALLSELEIMRCDNLMCLPQGLQSLTALTILRIVGCRHLERRCR RERGEDWPIIAHIPSIVIMSRGEYFFRGRRRPLGNLLTRVGDWTNGLSRK FWKS* back to top
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