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Properties
| Property Name | Value |
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| Model evidence | Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns |
| Product | putative disease resistance protein RGA1, transcript variant X1 |
| Note | Putative disease resistance protein RGA4 |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Tc04v2_t010350.1 ID=Tc04v2_t010350.1|Name=Tc04v2_t010350.1|organism=Theobroma cacao|type=mRNA|length=3465bp
ATGGCAGATGCTCTTCTTTCAGCCGTTCTAAACACCATCTTGGAGAACAT
AAACTCCCTGTGGCTTGAAGAGTTTGGGATCACAGGGGGATTGAAAACCG
AGCTTGAGAGTCTGCAGAGCACCTTAAGTACGATCCAAGCGGTACTTCTT
GATGCAGAGGAGAAGCAGTGGAAGAGTGAGGCTATCAAGAATTGGCTGGG
AAAACTCAAAGATACGGCTTATCATCTAGATGATATACTAGATGAGTTTG
CAACAAACACTCAAAAAGAAAGGCTGCAGAGAGATGCTAGAAGCCAGGTA
TGCACCTTCCATTACCTTCCTAAACAGCTTTTATTTCGCTCAAAGATGGC
GCATAAGTTGAAGGATGTTAGAGAAAAATTGGATGCAGTTGCTGGGGAGA
GATCCAAGTTCCATTTGAGAGAAGGGATGGAGCCCTTGGAGGACAGAGAA
GTGAGTGATACAGAGTGGAGAAAAACTAGCTCACTTGTAAATGAATTAGA
GGTGTATGGAAGAGATAAGGAGCTGGATAGAATAATCAATATGCTGTTGA
ACAATTTAGCAGATCAGGATGGGATTTCTGTTTACACTATATGTGGCATG
GGAGGACTCGGAAAGACAACACTTGCTCAATTGGTTTATAATGATGAAAG
CATAAGAAAGGCTTTTGATTTGAGAATTTGGGTATGTGTATCCGATGATT
TTGATATTACAAGATTAACAAAAGCCATTATAGAGTCCATTGAAGGAAAG
TGCAGTATAGAAGAACTAGATCCCCTGCTAAGACACCTACAAGAAAAACT
AATTGGGAAAAGGTTTTTGCTTGTATTGGATGATGTGTGGAATGAATATC
ACGAAAAGTGGGAAGGATTGAAGGAAGCATTTAGATGCGGTGCGAAAGGA
AGCACAGTTATAGTCACTACCCGTATCGAGAAAGTTGCCCTTATGATGAC
AACTACTCCTATACACCACTTGGGAAGCTTGTCCTGTGATGATTCTTGGT
CCTTATTCAAGCAGCGTGCGTTTAGGATGGGAAAGAGCGAGGATTACCCA
CACTTAGAAGCACTTGGAAAGGAAATAGTTAAGAAGTGTGGGGGGGTGCC
CTTAGCACTAAAGGCTTTGGGAGGTTTGTTGCGTTTCAAAGAAAGAGAGA
GTGAGTGGCTATCGATCAAAGAAAGCGAGATGTGGGAATTGGCAGATGAG
GGGAGCAAAGTCTTATCTGTGTTGAATTTGAGTTACAGACGTCTAAAACC
GCATTTGAGACAATGTTTTACATTTTGCTCTATATTTCCCAAAGATTATA
TCATGAGTAAAGAGCAGTTGATACAACTTTGGATGGCTAATGGCTTTGTT
CCTGCAAGAGGACAAATGAATTTGCATGACATGGGCTGTGAAATCTTCAA
TGAATTAGCTTGGAGGTCCTTTTTCCAAGAACTCGTGGAGGATTTTGAAG
GAAATTCAACATGTAAAATGCATGACCTTATCCATGATCTTGCACAATCA
ATTATGAGTTGCGAGTGCTCTGTGACTGAACCAAGTCAGCTAGTGTTGAC
TGCGCCCAAAACAGTTCGTCACATGTTTGCTTCTGGTAATTCGTCTATAT
TTGCTCCTTCAAATGTGGACAACCTACCCAAAGTCTGTTCCTTGCGCACA
TTGTTTGTACGTAACAACTTCCATTGGAGAATTGCAACTAAACAGAAGCA
TCTGAGGGCATTACACGTTACATTTAATGGAGGAATGAAAATCTCAATTG
ATGATAAGTTCAGACATCTAAGGTATCTGAGCCTTGTTAATTCTGGAATT
GAAACACTGCCAGAATCACTATGCAGCTTCCAAAAATTGCAGACACTAAA
TCTGATATGTTGTTATCACCTTCGCAAATTACCCAAAGGTTTGAAGCTCT
TGAAAAGTCTTACATATTTAGACATAAAATATTGTAATGCACTTACTCGT
ATGCCTGTTGGCCTGGGGCAATTGTCTTGCTTGCGTAGGCTGAGCATGTT
CATTGTGGGAAAGGACCGTGGTTGCTGTATAGACGAATTAAAAGGGCTGG
CTCTTGAGGGAGAGCTTTGCATTGAAGAACTTGATAATGTAAAAAGTTTA
ATAGATGCTAAAAGTGCCAATCTGATAATGAAGCAAAATCTAAGATCACT
AGGCTTATCTTGGCGCAAAATCGACAATTGTTACCTACATGAAAATGCTG
AAGAGGTTCTTAGTGGTCTCCAACCTCATTCAAGTTTGAAGACGCTAAGC
ATACGAAATTACCATGGTCCAAAGTTTTCATATTGGTTGATGGATCTCCT
TGTTCCAAACCTAGTTGACATCACACTGGTAAATTGTGAAAGATGTGAAT
GCCTTCCACCTCTTGGTAAATTAGGCTTCCTCAAGTCCCTCACCATTACT
GGAATGGATGCTCTAAAATCTATTGATAATAGCTTCTATGGAGATGGCGA
GAGTTCATTCTCGTCACTGGAGAGTCTCTGTTTCGAGAATATGCTTTCTT
TCGAGGAATGGACAACAGTGAAGGGGAAGGAAAATTTTCCTCAGCTAAGA
TCATTAGTTATTAGAGATTGTCCGAAGCTAGTTGAAATGCCTATGCTTCA
ATCTCTGAAAATATTAGAAATTAGCAAAACCAGCGTCTCATTACTTAGCT
CCGTGATGCATTTCACTTTTCTCACCTCTCTCTTACTGGGCGGCTTTGAT
GGCTTGACGGTTATGCCAGATGGACTATTGCAAAATCACAAGCACCTTGA
AAGCTTGGAGATACGTTTTAAAAAGCTGAAATCTCTATCAAATCTTCTAG
ATAACCTATCTGCTCTCGAGCAATTGGATCTTCAGGACTGCCTAGAGCTT
GAAAATATTCCAGCAGGACTAGAAAACCTCAGCTCTTTGGAGAGATTGCA
TTTAAGTGAGTGTAACAGCCTTGTAACCCTTCCAGAAGATGGATTGCGTG
GTTTATCTTCCCTTTCTTCGCTGTGGTTTCAAGGGTGTCAGAAATTAGCC
TCTTTATCTGATGGAGTGAGATATCTGACTTCGCTCCGAGACTTACTCGT
CAATGATTGTCCAGAGTTAAACTCATTGCCCGAGTGTATCCAACATCTCT
CTGCACTTCGGAGTTTGAGGATTTGGCATTGTGAGAGATTAACTTCTCTG
CCAAATGGGATAGAAAACCTTGCCTTGCTTTCAGAATTGGAGATCATGCG
TTGCGATAATCTAATGTGTCTGCCTCAAGGGCTACAGAGTCTCACGGCAC
TCACAATACTGAGGATTGTAGGATGCCGACATCTGGAAAGGCGGTGCAGG
AGAGAGAGAGGAGAGGATTGGCCCATCATAGCCCACATTCCTTCTATTGT
AATCATGTCCCGTGGAGAGTACTTTTTTCGAGGACGAAGAAGGCCTCTTG
GCAATCTGTTAACAAGGGTTGGTGATTGGACAAATGGGCTCTCCAGAAAG
TTTTGGAAATCTTAG back to topprotein sequence of Tc04v2_p010350.1 >Tc04v2_p010350.1 ID=Tc04v2_p010350.1|Name=Tc04v2_p010350.1|organism=Theobroma cacao|type=polypeptide|length=1155bp
MADALLSAVLNTILENINSLWLEEFGITGGLKTELESLQSTLSTIQAVLL
DAEEKQWKSEAIKNWLGKLKDTAYHLDDILDEFATNTQKERLQRDARSQV
CTFHYLPKQLLFRSKMAHKLKDVREKLDAVAGERSKFHLREGMEPLEDRE
VSDTEWRKTSSLVNELEVYGRDKELDRIINMLLNNLADQDGISVYTICGM
GGLGKTTLAQLVYNDESIRKAFDLRIWVCVSDDFDITRLTKAIIESIEGK
CSIEELDPLLRHLQEKLIGKRFLLVLDDVWNEYHEKWEGLKEAFRCGAKG
STVIVTTRIEKVALMMTTTPIHHLGSLSCDDSWSLFKQRAFRMGKSEDYP
HLEALGKEIVKKCGGVPLALKALGGLLRFKERESEWLSIKESEMWELADE
GSKVLSVLNLSYRRLKPHLRQCFTFCSIFPKDYIMSKEQLIQLWMANGFV
PARGQMNLHDMGCEIFNELAWRSFFQELVEDFEGNSTCKMHDLIHDLAQS
IMSCECSVTEPSQLVLTAPKTVRHMFASGNSSIFAPSNVDNLPKVCSLRT
LFVRNNFHWRIATKQKHLRALHVTFNGGMKISIDDKFRHLRYLSLVNSGI
ETLPESLCSFQKLQTLNLICCYHLRKLPKGLKLLKSLTYLDIKYCNALTR
MPVGLGQLSCLRRLSMFIVGKDRGCCIDELKGLALEGELCIEELDNVKSL
IDAKSANLIMKQNLRSLGLSWRKIDNCYLHENAEEVLSGLQPHSSLKTLS
IRNYHGPKFSYWLMDLLVPNLVDITLVNCERCECLPPLGKLGFLKSLTIT
GMDALKSIDNSFYGDGESSFSSLESLCFENMLSFEEWTTVKGKENFPQLR
SLVIRDCPKLVEMPMLQSLKILEISKTSVSLLSSVMHFTFLTSLLLGGFD
GLTVMPDGLLQNHKHLESLEIRFKKLKSLSNLLDNLSALEQLDLQDCLEL
ENIPAGLENLSSLERLHLSECNSLVTLPEDGLRGLSSLSSLWFQGCQKLA
SLSDGVRYLTSLRDLLVNDCPELNSLPECIQHLSALRSLRIWHCERLTSL
PNGIENLALLSELEIMRCDNLMCLPQGLQSLTALTILRIVGCRHLERRCR
RERGEDWPIIAHIPSIVIMSRGEYFFRGRRRPLGNLLTRVGDWTNGLSRK
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