Tc04v2_t009720.1

Overview
NameTc04v2_t009720.1
Unique NameTc04v2_t009720.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1347
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 26 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
ProductGDP-L-galactose phosphorylase 1
NoteGDP-L-galactose phosphorylase 1
Cross References
External references for this mRNA
DatabaseAccession
GeneID18601891
GenbankXM_007032981.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc04v2_g009720Tc04v2_g009720Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc04v2_p009720.1Tc04v2_p009720.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto217061auto217061Theobroma cacaoexon
exon-auto217062auto217062Theobroma cacaoexon
exon-auto217063auto217063Theobroma cacaoexon
exon-auto217064auto217064Theobroma cacaoexon
exon-auto217065auto217065Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto217066auto217066Theobroma cacaoCDS
CDS-auto217067auto217067Theobroma cacaoCDS
CDS-auto217068auto217068Theobroma cacaoCDS
CDS-auto217069auto217069Theobroma cacaoCDS
CDS-auto217070auto217070Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc04v2_t009720.1 ID=Tc04v2_t009720.1|Name=Tc04v2_t009720.1|organism=Theobroma cacao|type=mRNA|length=1347bp
ATGTTGACTATTAAGAGGGTTGCAACGGTTCTTTCGAATTACCAAGAGGA
TGCTTATGAAAAACAAGAAGTTGGGTGCGGTAGGAATTGCCTTGGAAACT
GTTGCATACCTGCATCGACGCTACCTCTGTATGCATTCCAGAAAGAGCAA
GACGATTCAGGGGAATATGGGGAGTTATATCCATCCGAGGAACAACCTCA
ACCATCATTCCTGAATCTGTTGCTTGAACAATGGGGCGACCGAATGAGAC
GAGGTTTATTTCGCTATGATGTAACGAATTGCAAGACAAAGATCATCCCA
GGGAAGTATGGTTTTATCGCGCAGCTCAATGAGGGGCGCCACCTCAAGAA
ACGGCCTACTGAGTTTCGGATAGATCAAGTCCTTCAGCCCTTTGATGATT
CTAAGTTCAACTTCACAAAAGTTGGACAAGAAGAAGTTCTTTTCAGGTTT
GAACAAAGCAATGACTGCAAGAGTCATTTCTTGGCTAGTGCACCTGTCAC
TGCAAAGCCCAACTACTCTCCTAATGTTATTGCAATCAATGTGAGCCCGA
TTGAATATGGGCATGTTCTGTTGATACCACATGTTCTTGACTGCTTGCCT
CAAAGGATTGATCATGACAGCTTCTTGCTTGCTATTCACTTGGCCAGAGA
AGCAGCAGATCCCTTCTTTAGAGTTGGTTATAACAGCCTGGGCGCTTTCG
CCACGATTAATCACCTCCACTTCCAGGCATATTATTTAGAAGTGCCCTTC
CCAATTGAGAAAGCTCCTATCCAAAGAATATCCACAGAGGAAGGATTGCA
AGATACGGGAGTTATTGTTTCACAGCTGTTGAATTATCCAGTTAGAGGCC
TTGTTTTCAAGGGCGGGAAGTCAGCGCAGGATCTGTCTGATGTTGTTGCC
AATACCTGCATTTTTCTTCAAACTAACAACATCCCCTTCAATGTCCTCAT
CTCTGATTGCGGAAAAAGAGTCTTCCTCTTGCCGCAGTGTTATGCCGAGA
AACAAGCAATAGGAGAAGTTAGTCAGGAGCTGCTACATACTCAAGTAAAC
CCTGCTGTTTGGGAGATCGGTGGACATATGGTGCTGAAGAGGCGCGAGGA
TTATGAAGATGCATCGGAGGCATATGCTTGGAGACTCCTAGCTGAGGTTT
CTTTGTCAGAGGAGAGGTTCCAGGAGGTGAAAGCTTGTATCCTGGAAGCA
GCAGCATTGCAAGCAACCAACATGAAGGAAACTGAAGTAAATCAGGCGGA
AGATAAGGTATATCAGAAAGAAGATTCATTGTGCAAGCAGCGTGCAGCAA
GCCAAGCCAACCAACGTGTACCATATGATTGCATGGTTTTGCAGTGA
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protein sequence of Tc04v2_p009720.1

>Tc04v2_p009720.1 ID=Tc04v2_p009720.1|Name=Tc04v2_p009720.1|organism=Theobroma cacao|type=polypeptide|length=449bp
MLTIKRVATVLSNYQEDAYEKQEVGCGRNCLGNCCIPASTLPLYAFQKEQ
DDSGEYGELYPSEEQPQPSFLNLLLEQWGDRMRRGLFRYDVTNCKTKIIP
GKYGFIAQLNEGRHLKKRPTEFRIDQVLQPFDDSKFNFTKVGQEEVLFRF
EQSNDCKSHFLASAPVTAKPNYSPNVIAINVSPIEYGHVLLIPHVLDCLP
QRIDHDSFLLAIHLAREAADPFFRVGYNSLGAFATINHLHFQAYYLEVPF
PIEKAPIQRISTEEGLQDTGVIVSQLLNYPVRGLVFKGGKSAQDLSDVVA
NTCIFLQTNNIPFNVLISDCGKRVFLLPQCYAEKQAIGEVSQELLHTQVN
PAVWEIGGHMVLKRREDYEDASEAYAWRLLAEVSLSEERFQEVKACILEA
AALQATNMKETEVNQAEDKVYQKEDSLCKQRAASQANQRVPYDCMVLQ*
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