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Properties
Property Name | Value |
Model evidence | Supporting evidence includes similarity to: 37 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments |
Product | geranylgeranyl pyrophosphate synthase, chloroplastic/chromoplastic |
Note | Geranylgeranyl pyrophosphate synthase, chloroplastic/chromoplastic |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
exon-auto216924 | auto216924 | Theobroma cacao | exon |
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
CDS-auto216925 | auto216925 | Theobroma cacao | CDS |
Sequences
The following sequences are available for this feature:
mRNA sequence >Tc04v2_t009550.1 ID=Tc04v2_t009550.1|Name=Tc04v2_t009550.1|organism=Theobroma cacao|type=mRNA|length=1086bp ATGGCCTTCTCTGCAATCATCCCAAGTCATAAAACCTCTTCTCTCATCAA AATCTCCATTGAAGATCCTATGAAGCTTACCCCATTTTCGCAGATCAACC TTGTTCCCAGGAAAATTCAGGCTAGCCAGATTGCAAACGCATCTTTACCA CAAGCGTTCGTATCCAAAGATGGGATGTCCAACTCTGACCCATTGCCTGC GTTTAACTTCGAAGAGTACATGGCGGACAAGGGACAACGAGTGAACAAAG CACTTATTAAGGCAGTCCCTTTGAAACATCCAATGCAAATTCATGAAGCA ATGAGGTACTCCCTTCTAGCTGGTGGCAAGCGCGTCCGTCCTATTCTTTG TATTGCTGCATGTGAGTTAGTAGGAGGAGAAGAGACCCTGGCAATGCCAG TGGCTTGCGCGGTGGAGATGATACATACAATGTCACTGATCCATGATGAT CTTCCTTGTATGGACAACGATGATCTTCGTCGGGGAAAGCCTACCAACCA CAAGGTTTTCGGGGAAGAAACTGCTGTTCTCGCTAGTGATGCTCTTCTCT CCCTTGCCTTTGAACATTTAGCTTCAAAGACGACCGAGAATATTTCGCCT GACCGTGTGGTTCGAGCCATTGCTGAGCTAGGGTCGGCAGTTGGATCAGA AGGGCTAGTGGGAGGCCAAATAGTGGATCTTGCGAGTGAAGGAAAAGAGA TAAGTTTGAATGAGTTAGAGTATATCCATTTGCATAAAACTGCCAAGCTT TTAGAGGCATCCGTTGTTTGTGGTGCTATAATTGGAGGAGGAAATGATGG TGATGTTGTAAGGGTTAAGAACTATGCTAGATCCATAGGGTTGTTGTTTC AGGTTGTGGATGATATTTTGGATGTGACCAAGTCCTCGGAGGAGCTTGGG AAGACGGCAGGGAAGGATTTGGTCAGTAATAAGGCCACTTATCCGAAGCT GATAGGCGTTGACAATGCCAAGAAGTTTGCAGGGGAGTTGATGACTCAAG CTGTTGAAGAGCTTGCCTATTTTGATCCCGCAAGAGCTGCTCCATTGTAC CATTTAGCCAAATTTATTTGTGATCGAGACAACTAG back to topprotein sequence of Tc04v2_p009550.1 >Tc04v2_p009550.1 ID=Tc04v2_p009550.1|Name=Tc04v2_p009550.1|organism=Theobroma cacao|type=polypeptide|length=362bp
MAFSAIIPSHKTSSLIKISIEDPMKLTPFSQINLVPRKIQASQIANASLP QAFVSKDGMSNSDPLPAFNFEEYMADKGQRVNKALIKAVPLKHPMQIHEA MRYSLLAGGKRVRPILCIAACELVGGEETLAMPVACAVEMIHTMSLIHDD LPCMDNDDLRRGKPTNHKVFGEETAVLASDALLSLAFEHLASKTTENISP DRVVRAIAELGSAVGSEGLVGGQIVDLASEGKEISLNELEYIHLHKTAKL LEASVVCGAIIGGGNDGDVVRVKNYARSIGLLFQVVDDILDVTKSSEELG KTAGKDLVSNKATYPKLIGVDNAKKFAGELMTQAVEELAYFDPARAAPLY HLAKFICDRDN* back to top
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