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Properties
Property Name | Value |
Model evidence | Supporting evidence includes similarity to: 2 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns |
Product | valine--tRNA ligase, chloroplastic/mitochondrial 2, transcript variant X5 |
Note | Valine--tRNA ligase, chloroplastic/mitochondrial 2 |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Tc04v2_t009540.6 ID=Tc04v2_t009540.6|Name=Tc04v2_t009540.6|organism=Theobroma cacao|type=mRNA|length=2700bp ATGTGGCAGTCTCAAGGGTATTTCAGGCCAAAATTTGACCGGGGAAGTGA TCCTTTTGTCATATCAATGCCACCACCTAATGTTACTGGCTCTCTGCACA TGGGACATGCAATGTTTGTGACTCTTGAGGATATCATGGTTAGGTACCAT CGCATGAGGGGAAGACCAACACTTTGGCTTCCTGGGACTGATCATGCTGG TATTGCGACTCAGTTGGTTGTGGAAAGAATGTTGGCGTCTGAAGGAATAA AAAGGGCAGAACTGGGCAGAGATGAATTTGCAAAACGAGTTTGGGAGTGG AAAGAGAAGTATGGTGGGACCATTACAAATCAGATTAAAAGACTTGGGGC TTCTTGTGATTGGACTAGAGAAAGGTTCACCCTTGATGAGCAGCTAAGTC GAGCTGTTGTTGAGGCGTTTGTTAAACTTCATGAAAAAGGTTTAATCTAT CAAGGGTCTTATATGGTTAACTGGTCTCCCAAGTTACAGACTGCTGTTTC AGACTTGGAAGTAGAATATTCTGAAGAGCCTGGTGCCCTATATTATATTA AGTATCGAGTTGCTGGAGGTTCAAGGAGTGATTTCTTGACAATAGCAACG ACGCGGCCTGAAACTTTGTTTGGTGATGTAGCTATTGCTGTGCATCCTCA GGATGAGCGATATTCCAAGTATGTTGGTCAAATGGCAATTGTTCCTATGA CATATGGTCGTCATGTTCCCATTATCTCTGATAAGTTTGTTGATAAAGAC TTTGGGACAGGTGTGCTGAAGATAAGCCCTGGCCATGATCATAATGATTA TCTTCTAGCTAGAAAGCTTGGTCTTCCAATTCTTAATGTTATGAACAAGG ATGGAACACTAAATGAGGTTGCCGGACTGTACTGTGGTCTTGATCGGTTT GAGGCACGGAAGAAATTGTGGTGCGAACTTGAGGAGACTGACTTAGCTGT GAAAAAGGAACCTTACACTTTACGAGTACCAAGATCCCAGCGTGGTGGAG AGGTAATAGAGCCATTAGTTAGCAAGCAATGGTTTGTAACAATGGAGCCC TTGGCTGAAAAGGCCCTTCGTGCAGTTGAAAAGGGAGAACTGACGATTAT GCCTGAAAGATTTGAGAAGATTTATAATCATTGGCTATCAAATATAAAGG ATTGGTGCATAAGCAGACAGCTGTGGTGGGGACACCGCATACCTGTTTGG TACATTGTTGGAAAAGACTGTGAAGAGGAATATATAGTTGCTAGGAGTGC TGAGGAAGCACTTATAAAGGCTTGTGATAAATATGGCAAAGAAATAGAAA TATATCAGGATCCAGATGTTCTTGACACTTGGTTCTCAAGTGCACTATGG CCTTTCAGTACTCTTGGGTGGCCAGATGTGTCAGCAGAGGATTTTAAAAG GTTTTATCCAACAACAATGCTTGAAACTGGGCATGATATATTGTTCTTTT GGGTTGCAAGAATGGTTATGATGGGAATTGAATTCACAGGAACTGTTCCA TTTTCGTATGTATATCTTCATGGACTTATCCGCGACTCAGAAGGGCGTAA AATGTCTAAAACTCTTGGGAATGTTATTGATCCCCTTGATACTATCGAGG AGTTTGGCACTGATGCCTTGCGATTCACTCTTGCTTTAGGAACTGCTGGT CAGGACCTTAATTTATCTACTGAGAGGCTAACAGCAAACAAAGCCTTCAC AAACAAATTGTGGAATGCTGGCAAATTTGTGCTGCAGAATCTTCCTGATC GGGATAATGTTTCTGGTTGGCAGACTATACAGGCATATAAGTTTGACATG GAGGAGTCTCTTTTAAGGCTTCCGCTTTCAGAATGTTGGGTGGTCTCAAA ACTGCATTTGCTTATTGATGCAGTCACTGAGAGTTATAACAAGTTTTTCT TTGGGGAAGTTGGAAGAGAAACGTATGATTTCATTTGGGGTGATTTTGCT GACTGGTATGTTGAATGCATTTATGAGTATATTGAAGCGAGTAAAGCTCG CCTTTACCACTCTGGAGATGATTCAGTTGCTTTAGTAGCACAGGCTGTTC TACTTTATGTGTTTGAGAGTATACTGAAACTATTACATCCATTCATGCCA TTTGTAACTGAGGAGCTGTGGCAGGCACTTCCCAATCGGAAAGAAGCTCT TATAATATCTTCTTGGCCACAAATTTCTCTTCCCAGGAACACTACTTTGG TAAAAAGATTTGAAAATTTACAAGCTCTGACTCGAGCAATCCGGAATGCT AGAGCTGAGTATTCTGTTGAGCCAGCAAAGCGTATATCTGCTTCTATTGT TGCCAGTGAAGAAGTCATTCAGTATATATCTGAAGAGAAGGAGGTTTTGG CTCTCTTATCCAGGCTAGATTTAGACAATATCCATTTCACTGATTCTCCT CCAGGGGATGCTAAACAATCAGTTCACCTTGTTGCAAGTGAAGGACTAGA GGCATATCTGCCCCTCACTGATATGGTTGATATTTCTGCTGAAGTCCAAC GCCTTTCCAAGCGCCTATCTAAGATGCAAACAGAGTATGAGGGACTTAAA GCTCGTCTCAAGTCCCCTAAATTCATAGAGAAAGCTCCTGAGGATATTGT CCGTGGGGTTCAGCAAAAAGCAGCAGAAGCAGAAGAGAAGATTAATTTGA CCAAAAACCGTTTGGATTTCCTCAAATCAACTGTTTTGGTTTCACAATAG back to topprotein sequence of Tc04v2_p009540.6 >Tc04v2_p009540.6 ID=Tc04v2_p009540.6|Name=Tc04v2_p009540.6|organism=Theobroma cacao|type=polypeptide|length=900bp
MWQSQGYFRPKFDRGSDPFVISMPPPNVTGSLHMGHAMFVTLEDIMVRYH RMRGRPTLWLPGTDHAGIATQLVVERMLASEGIKRAELGRDEFAKRVWEW KEKYGGTITNQIKRLGASCDWTRERFTLDEQLSRAVVEAFVKLHEKGLIY QGSYMVNWSPKLQTAVSDLEVEYSEEPGALYYIKYRVAGGSRSDFLTIAT TRPETLFGDVAIAVHPQDERYSKYVGQMAIVPMTYGRHVPIISDKFVDKD FGTGVLKISPGHDHNDYLLARKLGLPILNVMNKDGTLNEVAGLYCGLDRF EARKKLWCELEETDLAVKKEPYTLRVPRSQRGGEVIEPLVSKQWFVTMEP LAEKALRAVEKGELTIMPERFEKIYNHWLSNIKDWCISRQLWWGHRIPVW YIVGKDCEEEYIVARSAEEALIKACDKYGKEIEIYQDPDVLDTWFSSALW PFSTLGWPDVSAEDFKRFYPTTMLETGHDILFFWVARMVMMGIEFTGTVP FSYVYLHGLIRDSEGRKMSKTLGNVIDPLDTIEEFGTDALRFTLALGTAG QDLNLSTERLTANKAFTNKLWNAGKFVLQNLPDRDNVSGWQTIQAYKFDM EESLLRLPLSECWVVSKLHLLIDAVTESYNKFFFGEVGRETYDFIWGDFA DWYVECIYEYIEASKARLYHSGDDSVALVAQAVLLYVFESILKLLHPFMP FVTEELWQALPNRKEALIISSWPQISLPRNTTLVKRFENLQALTRAIRNA RAEYSVEPAKRISASIVASEEVIQYISEEKEVLALLSRLDLDNIHFTDSP PGDAKQSVHLVASEGLEAYLPLTDMVDISAEVQRLSKRLSKMQTEYEGLK ARLKSPKFIEKAPEDIVRGVQQKAAEAEEKINLTKNRLDFLKSTVLVSQ* back to top
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