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Properties
Property Name | Value |
Model evidence | Supporting evidence includes similarity to: 2 ESTs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns |
Product | valine--tRNA ligase, chloroplastic/mitochondrial 2, transcript variant X4 |
Note | Valine--tRNA ligase, chloroplastic/mitochondrial 2 |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Tc04v2_t009540.4 ID=Tc04v2_t009540.4|Name=Tc04v2_t009540.4|organism=Theobroma cacao|type=mRNA|length=2916bp ATGAGTCTCCACCAAATGGCTATCTCTCCTCCTTTTCTTTTATCTTCTCG CTCTGCTTACACCCTCAACCCTCTTCTCTTTGCCAAACATCGCCGTTTTT GCTTTCCTCTCTCTCAGTCTCGTTTCAGTTCGATAAAGCGTCGGAGCTTT GCTGTTGTTGCATCAGAGAATGGCGTTTTCACTTCTCCAGAGTTGGCAAA GTCTTTTGATTTTACTTCAGAGGAGCGGATATACAATTGGTGGCAGTCTC AAGGGTATTTCAGGCCAAAATTTGACCGGGGAAGTGATCCTTTTGTCATA TCAATGCCACCACCTAATGTTACTGGCTCTCTGCACATGGGACATGCAAT GTTTGTGACTCTTGAGGATATCATGGTTAGGTACCATCGCATGAGGGGAA GACCAACACTTTGGCTTCCTGGGACTGATCATGCTGGTATTGCGACTCAG TTGGTTGTGGAAAGAATGTTGGCGTCTGAAGGAATAAAAAGGGCAGAACT GGGCAGAGATGAATTTGCAAAACGAGTTTGGGAGTGGAAAGAGAAGTATG GTGGGACCATTACAAATCAGATTAAAAGACTTGGGGCTTCTTGTGATTGG ACTAGAGAAAGGTTCACCCTTGATGAGCAGCTAAGTCGAGCTGTTGTTGA GGCGTTTGTTAAACTTCATGAAAAAGGTTTAATCTATCAAGGGTCTTATA TGGTTAACTGGTCTCCCAAGTTACAGACTGCTGTTTCAGACTTGGAAGTA GAATATTCTGAAGAGCCTGGTGCCCTATATTATATTAAGTATCGAGTTGC TGGAGGTTCAAGGAGTGATTTCTTGACAATAGCAACGACGCGGCCTGAAA CTTTGTTTGGTGATGTAGCTATTGCTGTGCATCCTCAGGATGAGCGATAT TCCAAGTATGTTGGTCAAATGGCAATTGTTCCTATGACATATGGTCGTCA TGTTCCCATTATCTCTGATAAGTTTGTTGATAAAGACTTTGGGACAGGTG TGCTGAAGATAAGCCCTGGCCATGATCATAATGATTATCTTCTAGCTAGA AAGCTTGGTCTTCCAATTCTTAATGTTATGAACAAGGATGGAACACTAAA TGAGGTTGCCGGACTGTACTGTGGTCTTGATCGGTTTGAGGCACGGAAGA AATTGTGGTGCGAACTTGAGGAGACTGACTTAGCTGTGAAAAAGGAACCT TACACTTTACGAGTACCAAGATCCCAGCGTGGTGGAGAGGTAATAGAGCC ATTAGTTAGCAAGCAATGGTTTGTAACAATGGAGCCCTTGGCTGAAAAGG CCCTTCGTGCAGTTGAAAAGGGAGAACTGACGATTATGCCTGAAAGATTT GAGAAGATTTATAATCATTGGCTATCAAATATAAAGGATTGGTGCATAAG CAGACAGCTGTGGTGGGGACACCGCATACCTGTTTGGTACATTGTTGGAA AAGACTGTGAAGAGGAATATATAGTTGCTAGGAGTGCTGAGGAAGCACTT ATAAAGGCTTGTGATAAATATGGCAAAGAAATAGAAATATATCAGGATCC AGATGTTCTTGACACTTGGTTCTCAAGTGCACTATGGCCTTTCAGTACTC TTGGGTGGCCAGATGTGTCAGCAGAGGATTTTAAAAGGTTTTATCCAACA ACAATGCTTGAAACTGGGCATGATATATTGTTCTTTTGGGTTGCAAGAAT GGTTATGATGGGAATTGAATTCACAGGAACTGTTCCATTTTCGTATGTAT ATCTTCATGGACTTATCCGCGACTCAGAAGGGCGTAAAATGTCTAAAACT CTTGGGAATGTTATTGATCCCCTTGATACTATCGAGGAGTTTGGCACTGA TGCCTTGCGATTCACTCTTGCTTTAGGAACTGCTGGTCAGGACCTTAATT TATCTACTGAGAGGCTAACAGCAAACAAAGCCTTCACAAACAAATTGTGG AATGCTGGCAAATTTGTGCTGCAGAATCTTCCTGATCGGGATAATGTTTC TGGTTGGCAGACTATACAGGCATATAAGTTTGACATGGAGGAGTCTCTTT TAAGGCTTCCGCTTTCAGAATGTTGGGTGGTCTCAAAACTGCATTTGCTT ATTGATGCAGTCACTGAGAGTTATAACAAGTTTTTCTTTGGGGAAGTTGG AAGAGAAACGTATGATTTCATTTGGGGTGATTTTGCTGACTGGTATATTG AAGCGAGTAAAGCTCGCCTTTACCACTCTGGAGATGATTCAGTTGCTTTA GTAGCACAGGCTGTTCTACTTTATGTGTTTGAGAGTATACTGAAACTATT ACATCCATTCATGCCATTTGTAACTGAGGAGCTGTGGCAGGCACTTCCCA ATCGGAAAGAAGCTCTTATAATATCTTCTTGGCCACAAATTTCTCTTCCC AGGAACACTACTTTGGTAAAAAGATTTGAAAATTTACAAGCTCTGACTCG AGCAATCCGGAATGCTAGAGCTGAGTATTCTGTTGAGCCAGCAAAGCGTA TATCTGCTTCTATTGTTGCCAGTGAAGAAGTCATTCAGTATATATCTGAA GAGAAGGAGGTTTTGGCTCTCTTATCCAGGCTAGATTTAGACAATATCCA TTTCACTGATTCTCCTCCAGGGGATGCTAAACAATCAGTTCACCTTGTTG CAAGTGAAGGACTAGAGGCATATCTGCCCCTCACTGATATGGTTGATATT TCTGCTGAAGTCCAACGCCTTTCCAAGCGCCTATCTAAGATGCAAACAGA GTATGAGGGACTTAAAGCTCGTCTCAAGTCCCCTAAATTCATAGAGAAAG CTCCTGAGGATATTGTCCGTGGGGTTCAGCAAAAAGCAGCAGAAGCAGAA GAGAAGATTAATTTGACCAAAAACCGTTTGGATTTCCTCAAATCAACTGT TTTGGTTTCACAATAG back to topprotein sequence of Tc04v2_p009540.4 >Tc04v2_p009540.4 ID=Tc04v2_p009540.4|Name=Tc04v2_p009540.4|organism=Theobroma cacao|type=polypeptide|length=972bp
MSLHQMAISPPFLLSSRSAYTLNPLLFAKHRRFCFPLSQSRFSSIKRRSF AVVASENGVFTSPELAKSFDFTSEERIYNWWQSQGYFRPKFDRGSDPFVI SMPPPNVTGSLHMGHAMFVTLEDIMVRYHRMRGRPTLWLPGTDHAGIATQ LVVERMLASEGIKRAELGRDEFAKRVWEWKEKYGGTITNQIKRLGASCDW TRERFTLDEQLSRAVVEAFVKLHEKGLIYQGSYMVNWSPKLQTAVSDLEV EYSEEPGALYYIKYRVAGGSRSDFLTIATTRPETLFGDVAIAVHPQDERY SKYVGQMAIVPMTYGRHVPIISDKFVDKDFGTGVLKISPGHDHNDYLLAR KLGLPILNVMNKDGTLNEVAGLYCGLDRFEARKKLWCELEETDLAVKKEP YTLRVPRSQRGGEVIEPLVSKQWFVTMEPLAEKALRAVEKGELTIMPERF EKIYNHWLSNIKDWCISRQLWWGHRIPVWYIVGKDCEEEYIVARSAEEAL IKACDKYGKEIEIYQDPDVLDTWFSSALWPFSTLGWPDVSAEDFKRFYPT TMLETGHDILFFWVARMVMMGIEFTGTVPFSYVYLHGLIRDSEGRKMSKT LGNVIDPLDTIEEFGTDALRFTLALGTAGQDLNLSTERLTANKAFTNKLW NAGKFVLQNLPDRDNVSGWQTIQAYKFDMEESLLRLPLSECWVVSKLHLL IDAVTESYNKFFFGEVGRETYDFIWGDFADWYIEASKARLYHSGDDSVAL VAQAVLLYVFESILKLLHPFMPFVTEELWQALPNRKEALIISSWPQISLP RNTTLVKRFENLQALTRAIRNARAEYSVEPAKRISASIVASEEVIQYISE EKEVLALLSRLDLDNIHFTDSPPGDAKQSVHLVASEGLEAYLPLTDMVDI SAEVQRLSKRLSKMQTEYEGLKARLKSPKFIEKAPEDIVRGVQQKAAEAE EKINLTKNRLDFLKSTVLVSQ* back to top
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