Tc04v2_t009180.1

Overview
NameTc04v2_t009180.1
Unique NameTc04v2_t009180.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1458
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 27 ESTs, 26 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
Product6-phosphogluconate dehydrogenase, decarboxylating 1
Note6-phosphogluconate dehydrogenase, decarboxylating 3
Cross References
External references for this mRNA
DatabaseAccession
GeneID18601816
GenbankXM_007032886.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc04v2_g009180Tc04v2_g009180Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc04v2_p009180.1Tc04v2_p009180.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto215920auto215920Theobroma cacaoexon
exon-auto215921auto215921Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto215922auto215922Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc04v2_t009180.1 ID=Tc04v2_t009180.1|Name=Tc04v2_t009180.1|organism=Theobroma cacao|type=mRNA|length=1458bp
ATGGCTCCACCTACAAGAATAGGACTTGCTGGTTTGGCTGTTATGGGCCA
AAATCTTGCACTTAACATTGCCGAGAAAGGCTTCCCCATTTCTGTTTATA
ACCGAACTACTTCTAAAGTTGATGAGACTGTTGAAAGAGCTAAACAGGAA
GGAGATTTGCCTGTATTTGGTTTCCATGATCCTGAATCTTTTGTTCAGTC
GATCCAAAAACCTCGAGTGATAATCATGCTTGTTAAGGCAGGGGCTCCCG
TTGATCAAACCATTAAGACTCTCTCTAAGTACATGGAGAAAGGTGATTGT
ATCATAGATGGTGGCAACGAGTGGTATGAAAACACTGAGAGGCGGGCAAA
AGCTATGGCTGAACTGGGTTTGTTATACCTTGGAATGGGAGTTTCAGGTG
GTGAAGAAGGTGCACGAAATGGTCCCTCTTTGATGCCTGGAGGGTCATTT
GAAGCTTACAAATACATCGAAGACATTCTTCTTAAGGTTGCAGCTCAAGT
TCCAGATAGTGGCCCCTGTGTGACTTACATTGGCAAAGGAGGATCTGGTA
ATTTTGTCAAGATGGTTCATAATGGAATTGAATATGGTGATATGCAGCTG
ATTGCAGAGGCTTATGATGTGCTGAAATCTGTTGGAAAATTATCGAACAA
AGAACTACACTGTGTTTTCTCAGAATGGAATAAGGGGGAGCTTTTGAGCT
TCTTGATTGAAATCACTGCTGATATATTTGGAATTAAGGATGACAAGGGA
GATGGTTATTTAGTTGATAAGGTTTTGGACAAAACTGGCATGAAGGGTAC
TGGTAAATGGACTGTACAGCAAGCAGCTGATTTGTCTGTTGCAGCTCCCA
CAATTGCAGCTTCTTTGGATTCAAGGTTCCTTAGTGGATTGAAGGAGGAA
AGAGTTGAAGCTGCTAAAGTCTTCAAATCAGGAGGACTTGGTGATGTCTT
GACTGAGCAAACTGTGGACAAGGCAAGATTAATTGATGATGTAAGGCAAG
CTCTCTATGCATCCAAGATTTGCAGTTATGCTCAGGGCATGAATCTCATT
CGTGAAAAAAGCATTGAGAAGGGTTGGGACTTGAAATTGGGGGAACTGGC
TAGGATATGGAAGGGAGGTTGTATCATCCGAGCTATTTTTCTGGACAGAA
TCAAGAAGGCTTATGATAGAAACCCTGACCTTGCAAACCTTCTTGTTGAT
CCAGAGTTTGCAAAGGAAATCATTGACAGACAATCTGCTTGGAGAAGAGT
TGTTTGCCTTGCTATAAACTCAGGTATTAGCACTCCTGGCATGTCATCCA
GTCTTGCTTATTTTGACACCTATAGGAGGGAACGAGTACCAGCTAATATG
GTTCAAGCTCAACGAGATTATTTTGGTGCCCATACTTATGAAAGGATTGA
TATGGAGGGTTCTTTCCACACTGAATGGTTCAAGATTGCCAAACAGCTAA
AAAATTGA
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protein sequence of Tc04v2_p009180.1

>Tc04v2_p009180.1 ID=Tc04v2_p009180.1|Name=Tc04v2_p009180.1|organism=Theobroma cacao|type=polypeptide|length=486bp
MAPPTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQE
GDLPVFGFHDPESFVQSIQKPRVIIMLVKAGAPVDQTIKTLSKYMEKGDC
IIDGGNEWYENTERRAKAMAELGLLYLGMGVSGGEEGARNGPSLMPGGSF
EAYKYIEDILLKVAAQVPDSGPCVTYIGKGGSGNFVKMVHNGIEYGDMQL
IAEAYDVLKSVGKLSNKELHCVFSEWNKGELLSFLIEITADIFGIKDDKG
DGYLVDKVLDKTGMKGTGKWTVQQAADLSVAAPTIAASLDSRFLSGLKEE
RVEAAKVFKSGGLGDVLTEQTVDKARLIDDVRQALYASKICSYAQGMNLI
REKSIEKGWDLKLGELARIWKGGCIIRAIFLDRIKKAYDRNPDLANLLVD
PEFAKEIIDRQSAWRRVVCLAINSGISTPGMSSSLAYFDTYRRERVPANM
VQAQRDYFGAHTYERIDMEGSFHTEWFKIAKQLKN*
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