Tc04v2_t007900.1

Overview
NameTc04v2_t007900.1
Unique NameTc04v2_t007900.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length867
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 6 ESTs, 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
Productbiotin carboxyl carrier protein of acetyl-CoA carboxylase, chloroplastic
NotePutative Biotin carboxyl carrier protein of acetyl-CoA carboxylase 2, chloroplastic
Cross References
External references for this mRNA
DatabaseAccession
GeneID18601625
GenbankXM_007032639.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc04v2_g007900Tc04v2_g007900Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc04v2_p007900.1Tc04v2_p007900.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto213722auto213722Theobroma cacaoexon
exon-auto213723auto213723Theobroma cacaoexon
exon-auto213724auto213724Theobroma cacaoexon
exon-auto213725auto213725Theobroma cacaoexon
exon-auto213726auto213726Theobroma cacaoexon
exon-auto213727auto213727Theobroma cacaoexon
exon-auto213728auto213728Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto213729auto213729Theobroma cacaoCDS
CDS-auto213730auto213730Theobroma cacaoCDS
CDS-auto213731auto213731Theobroma cacaoCDS
CDS-auto213732auto213732Theobroma cacaoCDS
CDS-auto213733auto213733Theobroma cacaoCDS
CDS-auto213734auto213734Theobroma cacaoCDS
CDS-auto213735auto213735Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc04v2_t007900.1 ID=Tc04v2_t007900.1|Name=Tc04v2_t007900.1|organism=Theobroma cacao|type=mRNA|length=867bp
ATGGCTTCTTCAATCTCGGTTCCATGCCCCAAGATCTCGTCTATTTTAAG
AACAAATCAACTAAGCCAAACTCAAAGGATCTCTTTGCCTCTTCCTCAAA
GTTCCACGTCTAGCTCCAAATCTTCCTTGTCATTTGGATCTTCAATCCTG
GTCCCTGCATTTTCAGGATGTCAGTGGTCTAATGGGAAGCAAACTACAGC
ATTCAAGGGGCATGCGCAACTTAATGAGGTTGCTGCAGAGAAATCCTCAA
ATTCTATACCAGTAGTTGATGCAAAGCCTAAAGTTGAGTTGCCCAAGGAA
AATGATAAATCTTCAGAGAACACTATTCCAGATGTTGCAGCAATCTCAGC
ATTCATGACACAAGTTTCGGACCTTGTTAAACTTGTTGATTCAAGAGATA
TTACAGAGTTGCAACTGAAGCAGTCAGATTGTGAGCTTGTAATAAGAAAG
AAGGAAGCTTTGCAGCTGCCAGAGCCAGCGTCTCCCATCGTCATGCCACA
ATACATGCCTCATGCAATGTTTCAAACTCCACCTCCTGCACCCCCAGTAG
CAGCTCCTGCTCCTGTAAGCCCAGCCACTCCAGCACCAGCACCTTCCTCA
CACCCCCCTGCTAAAACAGGCAGTTCGTCTCATCCTCCCTTCAAATGCCC
GATGGCTGGAACCTTTTACAGGAGTCCTGCACCAGGTGAACCACCATTTG
TCAAGGTCGGAGATAAAGTACAGAAAGGTCAAGTTGTCTGCATCATCGAG
GCTATGAAACTGATGAATGAAATTGAAGCTGACCAATCCGGAACCATAAG
CGAGATATTGGCAGAGGACGGAAAAGCAGTTAGTGTAGACATGCCTCTAC
TTGTGATTGTGCCCTGA
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protein sequence of Tc04v2_p007900.1

>Tc04v2_p007900.1 ID=Tc04v2_p007900.1|Name=Tc04v2_p007900.1|organism=Theobroma cacao|type=polypeptide|length=289bp
MASSISVPCPKISSILRTNQLSQTQRISLPLPQSSTSSSKSSLSFGSSIL
VPAFSGCQWSNGKQTTAFKGHAQLNEVAAEKSSNSIPVVDAKPKVELPKE
NDKSSENTIPDVAAISAFMTQVSDLVKLVDSRDITELQLKQSDCELVIRK
KEALQLPEPASPIVMPQYMPHAMFQTPPPAPPVAAPAPVSPATPAPAPSS
HPPAKTGSSSHPPFKCPMAGTFYRSPAPGEPPFVKVGDKVQKGQVVCIIE
AMKLMNEIEADQSGTISEILAEDGKAVSVDMPLLVIVP*
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