|
Properties
Property Name | Value |
Model evidence | Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns |
Product | cyclic nucleotide-gated ion channel 2, transcript variant X2 |
Note | Cyclic nucleotide-gated ion channel 2 |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Tc04v2_t007700.2 ID=Tc04v2_t007700.2|Name=Tc04v2_t007700.2|organism=Theobroma cacao|type=mRNA|length=2124bp ATGCCTTCTCCGTCCAACTTGTCCCTCTCAAGGTGGATTGGACTCTGCCA GCTTCAAAACTCCCCCGGCGAGAACTCTGATCACAGCGGCGACATCAACG AAGACAACCCAATTTCCAACACCGTAGAATGCTACGCTTGCACTCAAGTA GGAGTTCCAGTTTTCCACTCCACCAGCTGCGACCATGCTCACCAACCTGA ATGGGAAGCCTCAGCAGGCTCTTCCCTTGTTCCCATTCAGGCCCGAGCGG GCCAGAAGAAGACTCAAGCTGCTGCATCTCGGCACCCTTCTGGCCCGTTA GGACGTGTGCTTGATCCAAGGAGCAAGCGCGTGCAGAAATGGAACCGCGC GTTCCTGCTGGCTCGTGGCATGGCCTTAGCTATTGATCCTCTGTTTTTCT ATGCTTTATCGATAGGCAGAGGTGGCTTTCCTTGTTTGTACATGGATGGT GGCCTTGCCGCCATTGTAACCGTCCTTCGCACGTGTGTCGACGCCGTGCA TTTGTTTCATCTATGGCTTCAGTTCAGGCTGGCGTACGTGTCAAGGGAGT CACTCGTCGTCGGTTGCGGCAAACTAGTGTGGGACGCACGTGCCATAGCT TCTCATTACGTTCGTTCCCTTAAAGGTTTCTGGTTTGATGCCTTTGTGAT TCTCCCAGTTCCTCAGGCAGTATTTTGGTTAGTTGTACCCAAACTAATCA GAGAAGAGCAGATCAAGCTTATAATGACTATACTGCTATTAATCTTCTTG TTCCAATTCCTCCCAAAGGTTTACCATAGCATTTGTTTGATGAGAAGGAT GCAGAAGGTCACAGGTTACATCTTTGGCACCATTTGGTGGGGGTTCGGCC TTAATCTCATAGCCTACTTCATAGCCTCTCATGTCGCTGGAGGATGCTGG TATGTCCTCGCAATACAGCGCGTAGCCTCATGCCTCCGGCAACAATGTGA GAGAAGTGAGAGGTGCAAACTCTCGTTGTCTTGCTCAGAGGAGGTGTGTT ACCAATTTCTATTTCCAGCCGAAGCAGTAGGGAATCCTTGTGGTGGTAAC TCAACAAAAGTTGTTGGAAAACCATTATGTTTAGATGTTCAGGGGCCATT CAATTACGGTATTTATCAGTGGGCTCTTCCTGTCGTTTCTAGCAATTCTG TTGCTGTTAAGATCCTTTATCCCATATTTTGGGGCTTAATGACTCTCAGC ACCTTTGGAAACGATCTTGAACCAACAAGTCACTGGTTAGAAGTGATGTT CAGTATATGCATTGTGCTTGCTGGATTGTTGCTCTTCACTTTATTGATTG GAAACATCCAGGTTTTCTTGCATGCTGTCATGGCGAAGAAGAGAAAAATG CAGCTGAGATGTCGTGACATGGAATGGTGGATGAAGCGTAGGCAGTTACC ATCCCGTTTGAGGCAAAGAGTTCGCCACTTTGAACGCCAGAAATGGGCAA CTCTGGGAGGAGAGGATGAAATGGAATTAATCAAAGACTTGCCTGAAGGC CTCCGGAGGGACATTAAGCGCTACCTTTGCCTTGACCTCATCAAAAAGGT TCCTCTGTTCCACAACTTGGATGACCTTATTCTTGACAACATCTGCGATC GAGTTAAGCCACTTGTCTTCTCTAAAGACGAAAAGATAATTAGAGAAGGA GATCCTGTGCAAAGAATGGTGTTTATAGTTCGTGGACGCATAAAGCGTAG CCAAAGCCTTAGCAAAGGCATGGTAGCCACAAGTATAATTGAGCCAGGAG GCTTTTTGGGTGATGAGCTGCTCTCCTGGTGTCTTCGTCGCCCATTTATA GACCGTCTTCCAGCCTCATCTGCAACATTTGTTTGTGTAGAGTCAATTGA AGCATTTGGCCTTGATGCAAACAATCTCAGATACATCACTGATCACTTCA GGTACAAATTTGCCAATGAGAGGCTTAAGAGAACAGCGAGATACTATTCA TCCAATTGGCGAACATGGGCAGCTGTGAATATACAACTTGCCTGGCGGCG TTACAGAACCAGGACTAGAGGTCCAATGATTTCTGTTACAGAGAATGGAA ACAGCAGTGATCGCCGGTTGCTGCAATATGCTGCAATGTTCATGTCAATC AGGCCACATGACCATCTAGAATAA back to topprotein sequence of Tc04v2_p007700.2 >Tc04v2_p007700.2 ID=Tc04v2_p007700.2|Name=Tc04v2_p007700.2|organism=Theobroma cacao|type=polypeptide|length=708bp
MPSPSNLSLSRWIGLCQLQNSPGENSDHSGDINEDNPISNTVECYACTQV GVPVFHSTSCDHAHQPEWEASAGSSLVPIQARAGQKKTQAAASRHPSGPL GRVLDPRSKRVQKWNRAFLLARGMALAIDPLFFYALSIGRGGFPCLYMDG GLAAIVTVLRTCVDAVHLFHLWLQFRLAYVSRESLVVGCGKLVWDARAIA SHYVRSLKGFWFDAFVILPVPQAVFWLVVPKLIREEQIKLIMTILLLIFL FQFLPKVYHSICLMRRMQKVTGYIFGTIWWGFGLNLIAYFIASHVAGGCW YVLAIQRVASCLRQQCERSERCKLSLSCSEEVCYQFLFPAEAVGNPCGGN STKVVGKPLCLDVQGPFNYGIYQWALPVVSSNSVAVKILYPIFWGLMTLS TFGNDLEPTSHWLEVMFSICIVLAGLLLFTLLIGNIQVFLHAVMAKKRKM QLRCRDMEWWMKRRQLPSRLRQRVRHFERQKWATLGGEDEMELIKDLPEG LRRDIKRYLCLDLIKKVPLFHNLDDLILDNICDRVKPLVFSKDEKIIREG DPVQRMVFIVRGRIKRSQSLSKGMVATSIIEPGGFLGDELLSWCLRRPFI DRLPASSATFVCVESIEAFGLDANNLRYITDHFRYKFANERLKRTARYYS SNWRTWAAVNIQLAWRRYRTRTRGPMISVTENGNSSDRRLLQYAAMFMSI RPHDHLE* back to top
|