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Properties
Property Name | Value |
Model evidence | Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns |
Product | cyclic nucleotide-gated ion channel 2, transcript variant X1 |
Note | Cyclic nucleotide-gated ion channel 2 |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Tc04v2_t007700.1 ID=Tc04v2_t007700.1|Name=Tc04v2_t007700.1|organism=Theobroma cacao|type=mRNA|length=2139bp ATGCCTTCTCCGTCCAACTTGTCCCTCTCAAGGTGGATTGGACTCTGCCA GCTTCAAAACTCCCCCGGCGAGAACTCTGATCACAGCGGCGACATCAACG AAGACAACCCAATTTCCAACACCGTAGAATGCTACGCTTGCACTCAAGTA GGAGTTCCAGTTTTCCACTCCACCAGCTGCGACCATGCTCACCAACCTGA ATGGGAAGCCTCAGCAGGCTCTTCCCTTGTTCCCATTCAGGCCCGAGCGG GCCAGAAGAAGACTCAAGCTGCTGCATCTCGGCACCCTTCTGGCCCGTTA GGACGTGTGCTTGATCCAAGGAGCAAGCGCGTGCAGAAATGGAACCGCGC GTTCCTGCTGGCTCGTGGCATGGCCTTAGCTATTGATCCTCTGTTTTTCT ATGCTTTATCGATAGGCAGAGGTGGCTTTCCTTGTTTGTACATGGATGGT GGCCTTGCCGCCATTGTAACCGTCCTTCGCACGTGTGTCGACGCCGTGCA TTTGTTTCATCTATGGCTTCAGTTCAGGCTGGCGTACGTGTCAAGGGAGT CACTCGTCGTCGGTTGCGGCAAACTAGTGTGGGACGCACGTGCCATAGCT TCTCATTACGTTCGTTCCCTTAAAGGTTTCTGGTTTGATGCCTTTGTGAT TCTCCCAGTTCCTCAGGCAGTATTTTGGTTAGTTGTACCCAAACTAATCA GAGAAGAGCAGATCAAGCTTATAATGACTATACTGCTATTAATCTTCTTG TTCCAATTCCTCCCAAAGGTTTACCATAGCATTTGTTTGATGAGAAGGAT GCAGAAGGTCACAGGTTACATCTTTGGCACCATTTGGTGGGGGTTCGGCC TTAATCTCATAGCCTACTTCATAGCCTCTCATGTCGCTGGAGGATGCTGG TATGTCCTCGCAATACAGCGCGTAGCCTCATGCCTCCGGCAACAATGTGA GAGAAGTGAGAGGTGCAAACTCTCGTTGTCTTGCTCAGAGGAGGTGTGTT ACCAATTTCTATTTCCAGCCGAAGCAGTAGGGAATCCTTGTGGTGGTAAC TCAACAAAAGTTGTTGGAAAACCATTATGTTTAGATGTTCAGGGGCCATT CAATTACGGTATTTATCAGTGGGCTCTTCCTGTCGTTTCTAGCAATTCTG TTGCTGTTAAGATCCTTTATCCCATATTTTGGGGCTTAATGACTCTCAGC ACCTTTGGAAACGATCTTGAACCAACAAGTCACTGGTTAGAAGTGATGTT CAGTATATGCATTGTGCTTGCTGGATTGTTGCTCTTCACTTTATTGATTG GAAACATCCAGGTTTTCTTGCATGCTGTCATGGCGAAGAAGAGAAAAATG CAGCTGAGATGTCGTGACATGGAATGGTGGATGAAGCGTAGGCAGTTACC ATCCCGTTTGAGGCAAAGAGTTCGCCACTTTGAACGCCAGAAATGGGCAA CTCTGGGAGGAGAGGATGAAATGGAATTAATCAAAGACTTGCCTGAAGGC CTCCGGAGGGACATTAAGCGCTACCTTTGCCTTGACCTCATCAAAAAGGT TCCTCTGTTCCACAACTTGGATGACCTTATTCTTGACAACATCTGCGATC GAGTTAAGCCACTTGTCTTCTCTAAAGACGAAAAGGTGCAAGCTTACGAG ATAATTAGAGAAGGAGATCCTGTGCAAAGAATGGTGTTTATAGTTCGTGG ACGCATAAAGCGTAGCCAAAGCCTTAGCAAAGGCATGGTAGCCACAAGTA TAATTGAGCCAGGAGGCTTTTTGGGTGATGAGCTGCTCTCCTGGTGTCTT CGTCGCCCATTTATAGACCGTCTTCCAGCCTCATCTGCAACATTTGTTTG TGTAGAGTCAATTGAAGCATTTGGCCTTGATGCAAACAATCTCAGATACA TCACTGATCACTTCAGGTACAAATTTGCCAATGAGAGGCTTAAGAGAACA GCGAGATACTATTCATCCAATTGGCGAACATGGGCAGCTGTGAATATACA ACTTGCCTGGCGGCGTTACAGAACCAGGACTAGAGGTCCAATGATTTCTG TTACAGAGAATGGAAACAGCAGTGATCGCCGGTTGCTGCAATATGCTGCA ATGTTCATGTCAATCAGGCCACATGACCATCTAGAATAA back to topprotein sequence of Tc04v2_p007700.1 >Tc04v2_p007700.1 ID=Tc04v2_p007700.1|Name=Tc04v2_p007700.1|organism=Theobroma cacao|type=polypeptide|length=713bp
MPSPSNLSLSRWIGLCQLQNSPGENSDHSGDINEDNPISNTVECYACTQV GVPVFHSTSCDHAHQPEWEASAGSSLVPIQARAGQKKTQAAASRHPSGPL GRVLDPRSKRVQKWNRAFLLARGMALAIDPLFFYALSIGRGGFPCLYMDG GLAAIVTVLRTCVDAVHLFHLWLQFRLAYVSRESLVVGCGKLVWDARAIA SHYVRSLKGFWFDAFVILPVPQAVFWLVVPKLIREEQIKLIMTILLLIFL FQFLPKVYHSICLMRRMQKVTGYIFGTIWWGFGLNLIAYFIASHVAGGCW YVLAIQRVASCLRQQCERSERCKLSLSCSEEVCYQFLFPAEAVGNPCGGN STKVVGKPLCLDVQGPFNYGIYQWALPVVSSNSVAVKILYPIFWGLMTLS TFGNDLEPTSHWLEVMFSICIVLAGLLLFTLLIGNIQVFLHAVMAKKRKM QLRCRDMEWWMKRRQLPSRLRQRVRHFERQKWATLGGEDEMELIKDLPEG LRRDIKRYLCLDLIKKVPLFHNLDDLILDNICDRVKPLVFSKDEKVQAYE IIREGDPVQRMVFIVRGRIKRSQSLSKGMVATSIIEPGGFLGDELLSWCL RRPFIDRLPASSATFVCVESIEAFGLDANNLRYITDHFRYKFANERLKRT ARYYSSNWRTWAAVNIQLAWRRYRTRTRGPMISVTENGNSSDRRLLQYAA MFMSIRPHDHLE* back to top
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