Tc04v2_t006130.1

Overview
NameTc04v2_t006130.1
Unique NameTc04v2_t006130.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1233
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 15 Proteins
Productprobable polygalacturonase At3g15720
NotePutative Probable polygalacturonase At3g15720
Cross References
External references for this mRNA
DatabaseAccession
GeneID18601444
GenbankXM_018119354.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc04v2_g006130Tc04v2_g006130Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc04v2_p006130.1Tc04v2_p006130.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto211123auto211123Theobroma cacaoexon
exon-auto211124auto211124Theobroma cacaoexon
exon-auto211125auto211125Theobroma cacaoexon
exon-auto211126auto211126Theobroma cacaoexon
exon-auto211127auto211127Theobroma cacaoexon
exon-auto211128auto211128Theobroma cacaoexon
exon-auto211129auto211129Theobroma cacaoexon
exon-auto211130auto211130Theobroma cacaoexon
exon-auto211131auto211131Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto211132auto211132Theobroma cacaoCDS
CDS-auto211133auto211133Theobroma cacaoCDS
CDS-auto211134auto211134Theobroma cacaoCDS
CDS-auto211135auto211135Theobroma cacaoCDS
CDS-auto211136auto211136Theobroma cacaoCDS
CDS-auto211137auto211137Theobroma cacaoCDS
CDS-auto211138auto211138Theobroma cacaoCDS
CDS-auto211139auto211139Theobroma cacaoCDS
CDS-auto211140auto211140Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc04v2_t006130.1 ID=Tc04v2_t006130.1|Name=Tc04v2_t006130.1|organism=Theobroma cacao|type=mRNA|length=1233bp
ATGGCCACCTGCAAACCACTCTTCCTAATTCTTTTGATTCAATGCATTTT
ATTGGCTGAATCTTGTGATCAAGATCAACACAACATTTTTGATGTCATTA
ATTTTGGAGCCATTGGAGATGGAGCTAACGATGATACAGAGGCCTTTAAG
CATGCTTGGGATGCTGTTTGCGGATCTTCAGTCTCTTCACCAACCTTCGT
TGTACCTGGAGGAAAGACCTTTGTGCTGCAACCCTTGACTTTCAATGGCC
AATGCAACTCAACTACCTTCACTTTCCAGATTAATGGCACTATCATTGCC
CCAAGCAATCCTTCTGAATGGAAATGCAATGATAAAAACTGTCACCAGTG
GATTACGTTTGAACATTTTGATGGCCTCTCCATTCAAGGATCTGGTACCA
TCAATGGCCAGGGAACAAACTGGTGGACTCTTTCTTGCGAAGATAATGAA
GAGCTCTGTGACAAAAAAGCAACGGGCTTTGTTATAGCACACTCCAACAA
CGTACAGATTAGTGAGTTGACCTTTGAGGACAGTCCCAAAGTGCACATCT
CATTAGAAAGGTCTACGTTGATTAATGCCACCAGACTCACAATCCAAGCC
CCAGGGGACAGCCCCAACACTGATGGCATTCACATCCAGCACTCCACTAA
TGTCTCCATAGACCAATCTCTCATCCAGACTGGTGATGATTGTGTATCAA
TCGGAGACGGTTCATCATACATCGATATTAGCAACATCAACTGCGGTCCA
GGCCATGGGATCAGCATTGGAAGTCTTGGAAGGAATGGACACAATGAGAG
CGTTGAATTTGTTCATGTAAGGGATGTTTCTTTCAACAGATCAACGAATG
GGGTTAGAATAAAGACATGGCAGGGAGGACATGGACATGTAAGAAACATA
ACATTTGAGCGTATAACATCTCATGGTGCAAGACGCCCTATCATCATCGA
CCAATATTATTGTCCCCATGATCATTGCAGCAATGAAACCTCGGCGGTGG
AGATTGACAATGTTGCTTACAGTCAAATAGAAGGGACAACAGACAGAGAG
ACTGCAGTGCAGCTTGCATGCAGTGAATCAACTCCATGCACGAACATCTT
CATGAAAGACATAAATTTGCGATATGAAGAAGATGAAGAGAAGACTTCAT
CATATTGTTTGAATGCTCAAGGGTTGAGAAATGGAAGAGTTAGTCCCAAT
GTAACTTGTTTACAACAAGATGATAATTTCTAA
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protein sequence of Tc04v2_p006130.1

>Tc04v2_p006130.1 ID=Tc04v2_p006130.1|Name=Tc04v2_p006130.1|organism=Theobroma cacao|type=polypeptide|length=411bp
MATCKPLFLILLIQCILLAESCDQDQHNIFDVINFGAIGDGANDDTEAFK
HAWDAVCGSSVSSPTFVVPGGKTFVLQPLTFNGQCNSTTFTFQINGTIIA
PSNPSEWKCNDKNCHQWITFEHFDGLSIQGSGTINGQGTNWWTLSCEDNE
ELCDKKATGFVIAHSNNVQISELTFEDSPKVHISLERSTLINATRLTIQA
PGDSPNTDGIHIQHSTNVSIDQSLIQTGDDCVSIGDGSSYIDISNINCGP
GHGISIGSLGRNGHNESVEFVHVRDVSFNRSTNGVRIKTWQGGHGHVRNI
TFERITSHGARRPIIIDQYYCPHDHCSNETSAVEIDNVAYSQIEGTTDRE
TAVQLACSESTPCTNIFMKDINLRYEEDEEKTSSYCLNAQGLRNGRVSPN
VTCLQQDDNF*
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